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用于预测二维材料氢吸附自由能的遗传描述符搜索算法

Genetic descriptor search algorithm for predicting hydrogen adsorption free energy of 2D material.

作者信息

Lee Jaehwan, Shin Seokwon, Lee Jaeho, Han Young-Kyu, Lee Woojin, Son Youngdoo

机构信息

Department of Industrial and Systems Engineering, Dongguk University-Seoul, Seoul, 04620, South Korea.

Data Science Laboratory (DSLAB), Dongguk University-Seoul, Seoul, 04620, South Korea.

出版信息

Sci Rep. 2023 Aug 5;13(1):12729. doi: 10.1038/s41598-023-39696-0.

DOI:10.1038/s41598-023-39696-0
PMID:37543706
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10404247/
Abstract

Transition metal dichalcogenides (TMDs) have emerged as a promising alternative to noble metals in the field of electrocatalysts for the hydrogen evolution reaction. However, previous attempts using machine learning to predict TMD properties, such as catalytic activity, have been shown to have limitations in their dependence on large amounts of training data and massive computations. Herein, we propose a genetic descriptor search that efficiently identifies a set of descriptors through a genetic algorithm, without requiring intensive calculations. We conducted both quantitative and qualitative experiments on a total of 70 TMDs to predict hydrogen adsorption free energy ([Formula: see text]) with the generated descriptors. The results demonstrate that the proposed method significantly outperformed the feature extraction methods that are currently widely used in machine learning applications.

摘要

过渡金属二硫属化物(TMDs)已成为析氢反应电催化剂领域中贵金属的一种有前景的替代品。然而,先前使用机器学习预测TMD性质(如催化活性)的尝试已表明,它们在依赖大量训练数据和大量计算方面存在局限性。在此,我们提出一种遗传描述符搜索方法,该方法通过遗传算法有效地识别一组描述符,而无需进行密集计算。我们对总共70种TMD进行了定量和定性实验,以使用生成的描述符预测氢吸附自由能([公式:见正文])。结果表明,所提出的方法明显优于目前在机器学习应用中广泛使用的特征提取方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cdb7/10404247/79eb31eed7c4/41598_2023_39696_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cdb7/10404247/49d7743f308a/41598_2023_39696_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cdb7/10404247/7c294b0a0a0e/41598_2023_39696_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cdb7/10404247/2e07e6b6ff00/41598_2023_39696_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cdb7/10404247/79eb31eed7c4/41598_2023_39696_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cdb7/10404247/49d7743f308a/41598_2023_39696_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cdb7/10404247/7c294b0a0a0e/41598_2023_39696_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cdb7/10404247/2e07e6b6ff00/41598_2023_39696_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cdb7/10404247/79eb31eed7c4/41598_2023_39696_Fig4_HTML.jpg

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本文引用的文献

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J Phys Chem Lett. 2023 May 11;14(18):4164-4171. doi: 10.1021/acs.jpclett.3c00534. Epub 2023 Apr 27.
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Tip-induced excitonic luminescence nanoscopy of an atomically resolved van der Waals heterostructure.针尖诱导的原子分辨范德华异质结构的激子发光纳米显微镜术
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Multi-order graph attention network for water solubility prediction and interpretation.
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New magneto-polaron resonances in a monolayer of a transition metal dichalcogenide.过渡金属二硫属化物单层中的新磁极化子共振。
Sci Rep. 2023 Jan 6;13(1):292. doi: 10.1038/s41598-023-27404-x.
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Quantitative structure-activity relationship modeling for predication of inhibition potencies of imatinib derivatives using SMILES attributes.基于 SMILES 属性的定量构效关系模型预测伊马替尼衍生物的抑制效力。
Sci Rep. 2022 Dec 15;12(1):21708. doi: 10.1038/s41598-022-26279-8.
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Activation of nitrogen species mixed with Ar and HS plasma for directly N-doped TMD films synthesis.用于直接合成氮掺杂过渡金属二硫属化物(TMD)薄膜的与氩气和硫化氢(HS)等离子体混合的氮物种的激活。
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Reconciling the Volcano Trend with the Butler-Volmer Model for the Hydrogen Evolution Reaction.将氢析出反应的火山趋势与巴特勒-沃尔默模型相协调。
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