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TRGdb:一个用于探索细菌中分类受限基因的通用资源。

TRGdb: a universal resource for the exploration of taxonomically restricted genes in bacteria.

机构信息

Department of Computational Biology, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Uniwersytetu Poznanskiego 6, Poznan 61-614, Poland.

出版信息

Database (Oxford). 2023 Aug 8;2023. doi: 10.1093/database/baad058.

Abstract

The TRGdb database is a resource dedicated to taxonomically restricted genes (TRGs) in bacteria. It provides a comprehensive collection of genes that are specific to different genera and species, according to the latest release of bacterial taxonomy. The user interface allows for easy browsing and searching as well as sequence similarity exploration. The website also provides information on each TRG protein sequence, including its level of disorder, complexity and tendency to aggregate. TRGdb is a valuable resource for gaining a deeper understanding of the TRG-associated, unique features, and characteristics of bacterial organisms. Database URL www.combio.pl/trgdb.

摘要

TRGdb 数据库是一个专门针对细菌中分类受限基因(TRGs)的资源。根据最新的细菌分类学发布,它提供了一个全面的基因集合,这些基因是特定于不同属和种的。用户界面允许轻松浏览和搜索以及序列相似性探索。该网站还提供了有关每个 TRG 蛋白质序列的信息,包括其无序程度、复杂性和聚集倾向。TRGdb 是深入了解与 TRG 相关的细菌生物体的独特特征和特征的有价值的资源。数据库网址:www.combio.pl/trgdb。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/46f6/10410690/a0ea7434e34b/baad058f1.jpg

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