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Construction and validation of a predictive nomogram for ferroptosis-related genes in osteosarcoma.

作者信息

Meng Jinzhi, Du Huawei, Lu Jinfeng, Wang Hongtao

机构信息

Bone and Joint Surgery, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.

Department of Pathology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.

出版信息

J Cancer Res Clin Oncol. 2023 Nov;149(15):14227-14239. doi: 10.1007/s00432-023-05225-9. Epub 2023 Aug 9.


DOI:10.1007/s00432-023-05225-9
PMID:37555953
Abstract

BACKGROUND: Ferroptosis is a new type of cellular regulation of necrosis that has attracted great attention in recent years, which is different from the traditional mode of autophagy, apoptosis, and necrosis. Studies suggest that ferroptosis is key to the occurrence and development of tumors. METHODS: Here, we investigated the prognostic significance of ferroptosis-related genes (FRGs) in osteosarcoma (OS) using RNA transcriptome data from 88 OS samples collected from the UCSC Xena platform. We defined the OS sample from the UCSC platform as the training cohort and the GEO dataset (GSE21257 and GSE16091) as the validation cohorts. We assessed 73 up-regulated and 63 down-regulated FRGs. We divided patients from the UCSC database into groups at high risk and low risk and built a prognostic risk model to assess prognosis using five FRGs: MT1G, G6PD, ARNTL, BNIP3, and SQLE. RESULTS: High-risk OS patients presented a lower survival rate. These results were confirmed in the validation groups. In the training group, the areas under the ROC curves (AUC) were as follows: 0.880 for 1 year, 0.833 for 3 years, and 0.818 for 5 years. In the GSE21257 validation cohort, the AUC were as follows: 0.770 for 1 year, 0.641 for 3 years, and 0.632 for 5 years survival, and in the GSE16091 were 0.729 for 1 year, 0.663 for 3 years, and 0.735 for 5 years survival. CONCLUSIONS: These findings suggest that FRGs are associated with the prognosis of osteosarcoma. Moreover, our prognostic risk model can predict overall survival in osteosarcoma. This provides new ideas for the clinical diagnosis and personalized treatment of osteosarcoma.

摘要

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[2]
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[5]
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本文引用的文献

[1]
MYC regulates CSF1 expression via microRNA 17/20a to modulate tumor-associated macrophages in osteosarcoma.

JCI Insight. 2023-7-10

[2]
Integrated Cascade Nanozyme Remodels Chondrocyte Inflammatory Microenvironment in Temporomandibular Joint Osteoarthritis via Inhibiting ROS-NF-κB and MAPK Pathways.

Adv Healthc Mater. 2023-4

[3]
Broadening horizons: the role of ferroptosis in cancer.

Nat Rev Clin Oncol. 2021-5

[4]
A Novel Long Non-Coding RNA lnc030 Maintains Breast Cancer Stem Cell Stemness by Stabilizing SQLE mRNA and Increasing Cholesterol Synthesis.

Adv Sci (Weinh). 2020-11-30

[5]
Reactivity-Based Probe of the Iron(II)-Dependent Interactome Identifies New Cellular Modulators of Ferroptosis.

J Am Chem Soc. 2020-11-11

[6]
The ferroptosis and iron-metabolism signature robustly predicts clinical diagnosis, prognosis and immune microenvironment for hepatocellular carcinoma.

Cell Commun Signal. 2020-10-28

[7]
Development of a novel immune-related genes prognostic signature for osteosarcoma.

Sci Rep. 2020-10-27

[8]
FerrDb: a manually curated resource for regulators and markers of ferroptosis and ferroptosis-disease associations.

Database (Oxford). 2020-1-1

[9]
Immune-related prognosis biomarkers associated with osteosarcoma microenvironment.

Cancer Cell Int. 2020-3-16

[10]
Cyclin E1 is a prognostic biomarker and potential therapeutic target in osteosarcoma.

J Orthop Res. 2020-3-23

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