Rahmani Roja, Lyubartsev Alexander P
Department of Materials and Environmental Chemistry, Stockholm University, S-10691 Stockholm, Sweden.
Nanomaterials (Basel). 2023 Aug 2;13(15):2239. doi: 10.3390/nano13152239.
The understanding of interactions between nanomaterials and biological molecules is of primary importance for biomedical applications of nanomaterials, as well as for the evaluation of their possible toxic effects. Here, we carried out extensive molecular dynamics simulations of the adsorption properties of about 30 small molecules representing biomolecular fragments at ZnS surfaces in aqueous media. We computed adsorption free energies and potentials of mean force of amino acid side chain analogs, lipids, and sugar fragments to ZnS (110) crystal surface and to a spherical ZnS nanoparticle. Furthermore, we investigated the effect of poly-methylmethacrylate (PMMA) coating on the adsorption preferences of biomolecules to ZnS. We found that only a few anionic molecules: aspartic and glutamic acids side chains, as well as the anionic form of cysteine show significant binding to pristine ZnS surface, while other molecules show weak or no binding. Spherical ZnS nanoparticles show stronger binding of these molecules due to binding at the edges between different surface facets. Coating of ZnS by PMMA changes binding preferences drastically: the molecules that adsorb to a pristine ZnS surface do not adsorb on PMMA-coated surfaces, while some others, particularly hydrophobic or aromatic amino-acids, show high binding affinity due to binding to the coating. We investigate further the hydration properties of the ZnS surface and relate them to the binding preferences of biomolecules.
了解纳米材料与生物分子之间的相互作用对于纳米材料的生物医学应用以及评估其可能的毒性作用至关重要。在此,我们进行了广泛的分子动力学模拟,研究了约30种代表生物分子片段的小分子在水介质中于ZnS表面的吸附特性。我们计算了氨基酸侧链类似物、脂质和糖片段对ZnS(110)晶体表面及球形ZnS纳米颗粒的吸附自由能和平均力势。此外,我们研究了聚甲基丙烯酸甲酯(PMMA)涂层对生物分子在ZnS上吸附偏好的影响。我们发现,只有少数阴离子分子:天冬氨酸和谷氨酸侧链以及半胱氨酸的阴离子形式与原始ZnS表面有显著结合,而其他分子结合较弱或无结合。球形ZnS纳米颗粒由于在不同表面小面之间的边缘处结合,对这些分子表现出更强的结合力。PMMA对ZnS的涂层极大地改变了结合偏好:吸附到原始ZnS表面的分子不会吸附在PMMA涂层表面,而其他一些分子,特别是疏水或芳香族氨基酸,由于与涂层结合而表现出高结合亲和力。我们进一步研究了ZnS表面的水化性质,并将其与生物分子的结合偏好相关联。