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从[具体来源]中选取的植物甾醇的色谱分析及其通过与潜在治疗靶点对接进行的表征。

Chromatographic analysis of selected phytosterols from and their characterization by docking to potential therapeutic targets.

作者信息

Janakiraman N, Anne Wincy J, Johnson M, Beatriz Herminia Ducati Ana, Eduardo de Oliveira Soares Carlos, Saraiva de Alencar Beltrão Claudia, Coutinho H D M

机构信息

Centre for Plant Biotechnology, Department of Botany, St. Xavier's College (Autonomous), Palayamkottai - 627 002, Tamil Nadu, India.

Department of Botany, The Madura College (Autonomous), Madurai 625 011, Tamil Nadu, India.

出版信息

Curr Res Toxicol. 2023 Jul 27;5:100115. doi: 10.1016/j.crtox.2023.100115. eCollection 2023.

DOI:10.1016/j.crtox.2023.100115
PMID:37575338
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10415621/
Abstract

Separation and quantification of lupeol, stigmasterol and swertiamarin in ethanolic extracts of selected species have been developed using HPTLC and an attempt is made to explore the biopotential of phytochemicals against various proteins by computational analysis. Compounds were separated using the specific mobile phase and the developed plates were sprayed with respective spraying reagents. The 3D structure of the receptor proteins viz., 1VSN, 5BNQ, 6HN8, 7DN4 and 3TJU, and the 3D SDF structures of ligands like lupeol, stigmasterol and swertiamarin were retrieved from the Protein Data Bank (PDB) and NCBI-Pub Chem Compound database respectively. The Argus 4.0.1 is computer generated drug design screening software is employed to analyze the binding affinity of test compounds against the selected proteins in the form of E-values versus potential drug targets. The docking result was saved and visualized using Discovery Studio Visualizer. The terpenoid band with R value 0.79 depicted the presence of lupeol in (0.04%) and (0.02%) The steroid band with R value 0.41 confirmed the presence of stigmasterol with varied frequency viz., (0.33%), (0.29%) and (0.52%). Lupeol, stigmasterol and swertiamarin showed the interaction against the studied proteins viz., 1VSN, 5BNQ, 6HN8, 7DN4, 3TJU with varied energy values and interacting residues. The results of the virtual screening and molecular docking analysis suggest that the phytochemical compounds of species viz., lupeol and stigmasterol were identified as possible lead molecules to fight against cancer and cytotoxicity.

摘要

已利用高效薄层色谱法(HPTLC)对选定物种乙醇提取物中的羽扇豆醇、豆甾醇和獐牙菜苦苷进行了分离和定量,并尝试通过计算分析探索植物化学物质对各种蛋白质的生物活性。使用特定的流动相分离化合物,并用相应的喷雾试剂对展开的薄板进行喷雾。分别从蛋白质数据库(PDB)和NCBI - PubChem化合物数据库中检索受体蛋白即1VSN、5BNQ、6HN8、7DN4和3TJU的三维结构,以及羽扇豆醇、豆甾醇和獐牙菜苦苷等配体的三维SDF结构。使用计算机生成的药物设计筛选软件Argus 4.0.1以E值对潜在药物靶点的形式分析测试化合物与选定蛋白质的结合亲和力。对接结果使用Discovery Studio Visualizer保存并可视化。R值为0.79的萜类带表明羽扇豆醇存在于(0.04%)和(0.02%)中。R值为0.41的甾类带证实了豆甾醇的存在,其频率各不相同,即(0.33%)、(0.29%)和(0.52%)。羽扇豆醇、豆甾醇和獐牙菜苦苷对所研究的蛋白质即1VSN、5BNQ、6HN8、7DN4、3TJU表现出相互作用,能量值和相互作用残基各不相同。虚拟筛选和分子对接分析结果表明,该物种的植物化学化合物即羽扇豆醇和豆甾醇被确定为对抗癌症和细胞毒性的可能先导分子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/41a37a047a37/gr9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/81616351443a/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/3fa030d61442/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/ed150f3f5320/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/4a2331fe5865/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/c350b4bc9667/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/02b90a5e8f79/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/a9e31186efba/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/19d4f8cadba9/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/44f879ff27ac/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/41a37a047a37/gr9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/81616351443a/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/3fa030d61442/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/ed150f3f5320/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/4a2331fe5865/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/c350b4bc9667/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/02b90a5e8f79/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/a9e31186efba/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/19d4f8cadba9/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/44f879ff27ac/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2e8/10415621/41a37a047a37/gr9.jpg

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