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Differentially Expressed Circulating Long-Noncoding RNAS in Premature Infants with Respiratory Distress Syndrome.

作者信息

Bao Z D, Wan J, Zhu W, Shen J X, Yang Y, Zhou X Y

机构信息

Department of Neonatology, Children's Hospital of Nanjing Medical University, Nanjing, Jiangsu 210008, P.R. China.

Department of Neonatology, Jiangyin People's Hospital of Nantong University, Jiangyin, Jiangsu 214400, P.R. China.

出版信息

Balkan J Med Genet. 2023 Jul 31;26(1):11-20. doi: 10.2478/bjmg-2023-0011. eCollection 2023 Jul.


DOI:10.2478/bjmg-2023-0011
PMID:37576795
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10413991/
Abstract

PURPOSE: Recent studies have addressed the association between lung development and long-noncoding RNAs (lncRNAs). But few studies have investigated the role of lncRNAs in neonatal respiratory distress syndrome (RDS). Thus, this study aimed to compare the expression profile of circulating lncRNAs between RDS infants and controls. METHODS: 10 RDS infants and 5 controls were enrolled. RDS patients were further divided into mild and severe RDS subgroups. Blood samples were collected for the lncRNA expression profile. Subsequently, differentially expressed lncRNAs were screened out. Bioinformatics analysis was applied to establish a co-expression network of differential lncRNAs and mRNAs, and predict the underlying biological functions. RESULTS: A total of 135 differentially expressed lncRNAs were identified, including 108 upregulated and 27 downregulated lncRNAs (fold-change>2 and <0.05) among the three groups (non-RDS, mild RDS and severe RDS groups). Of these lncRNAs, four were selected as showing higher fold changes and validated by qRT-PCR. ENST00000470527.1, ENST00000504497.1, ENST00000417781.5, and ENST00000440408.5 were increased not only in the plasma of total RDS patients but also in the severe RDS subgroup. Gene Ontology (GO) and Kyoto encyclopedia of genes and genomes (KEGG) analyses showed that differentially expressed lncRNAs may play important roles in RDS through regulating PI3KAkt, RAS, MAPK, and TGF-β signaling pathways. CONCLUSION: The present results found that ENST00000470527.1, ENST00000504497.1, ENST00000417781.5, and ENST00000440408.5 may be invol ved in RDS. This could provide new insight into research of the potential pathophysiological mechanisms of preterm RDS.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb2/10413991/cda1c407b2a0/j_bjmg-2023-0011_fig_005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb2/10413991/489fdca529e3/j_bjmg-2023-0011_fig_001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb2/10413991/312245bf8b87/j_bjmg-2023-0011_fig_002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb2/10413991/fef2a69b9079/j_bjmg-2023-0011_fig_003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb2/10413991/07ebb7a5c841/j_bjmg-2023-0011_fig_004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb2/10413991/cda1c407b2a0/j_bjmg-2023-0011_fig_005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb2/10413991/489fdca529e3/j_bjmg-2023-0011_fig_001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb2/10413991/312245bf8b87/j_bjmg-2023-0011_fig_002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb2/10413991/fef2a69b9079/j_bjmg-2023-0011_fig_003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb2/10413991/07ebb7a5c841/j_bjmg-2023-0011_fig_004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb2/10413991/cda1c407b2a0/j_bjmg-2023-0011_fig_005.jpg

相似文献

[1]
Differentially Expressed Circulating Long-Noncoding RNAS in Premature Infants with Respiratory Distress Syndrome.

Balkan J Med Genet. 2023-7-31

[2]
Identification of key genes for hypertrophic cardiomyopathy using integrated network analysis of differential lncRNA and gene expression.

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[3]
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Cell Physiol Biochem. 2019

[4]
Expression Profile and Potential Functions of Circulating Long Noncoding RNAs in Acute Ischemic Stroke in the Southern Chinese Han Population.

Front Mol Neurosci. 2019-11-29

[5]
Duodenal long noncoding RNAs are associated with glycemic control after bariatric surgery in high-fat diet-induced diabetic mice.

Surg Obes Relat Dis. 2017-2-20

[6]
Potential functions of long non‑coding RNAs in the osteogenic differentiation of human bone marrow mesenchymal stem cells.

Mol Med Rep. 2018-11-20

[7]
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Arthritis Res Ther. 2014-10-4

[8]
Construction and analysis for differentially expressed long non-coding RNAs and mRNAs in acute myocardial infarction.

Sci Rep. 2020-4-24

[9]
Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.

BMC Genomics. 2022-11-30

[10]
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本文引用的文献

[1]
Exploring the Molecular Mechanism of lncRNA-miRNA-mRNA Networks in Non-Syndromic Cleft Lip with or without Cleft Palate.

Int J Gen Med. 2021-12-16

[2]
Microarray and Bioinformatics Analysis of Circular RNA Differential Expression in Newborns With Acute Respiratory Distress Syndrome.

Front Pediatr. 2021-11-2

[3]
Circulating Plasma miRNA and Clinical/Hemodynamic Characteristics Provide Additional Predictive Information About Acute Pulmonary Thromboembolism, Chronic Thromboembolic Pulmonary Hypertension and Idiopathic Pulmonary Hypertension.

Front Pharmacol. 2021-5-28

[4]
Expression profiles of long non-coding RNAs during fetal lung development.

Exp Ther Med. 2020-12

[5]
Emerging roles of long non-coding RNAs in osteonecrosis of the femoral head.

Am J Transl Res. 2020-9-15

[6]
Silencing TTTY15 mitigates hypoxia-induced mitochondrial energy metabolism dysfunction and cardiomyocytes apoptosis via TTTY15/let-7i-5p and TLR3/NF-κB pathways.

Cell Signal. 2020-12

[7]
Lymecycline reverses acquired EGFR-TKI resistance in non-small-cell lung cancer by targeting GRB2.

Pharmacol Res. 2020-9

[8]
MicroRNA‑431 inhibits the expression of surfactant proteins through the BMP4/activin/TGF‑β signaling pathway by targeting SMAD4.

Int J Mol Med. 2020-5

[9]
Peptidomics analysis of umbilical cord blood reveals potential preclinical biomarkers for neonatal respiratory distress syndrome.

Life Sci. 2019-9-7

[10]
Diversity and heterogeneity of extracellular RNA in human plasma.

Biochimie. 2019-5-17

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