Faculty of Medicine, Institute of Neuropathology, Medical Center - University of Freiburg, Freiburg, Germany.
Faculty of Biology, University of Freiburg, Freiburg, Germany.
Methods Mol Biol. 2023;2696:169-197. doi: 10.1007/978-1-0716-3350-2_12.
The inflammasome-nucleating cytoplasmic sensor protein NLRP3 (NACHT-, LRR, and PYD domains-containing protein 3, also known as NOD-like receptor pyrin domain-containing 3, NALP3, or cryopyrin) is triggered by a broad spectrum of sterile endogenous danger signals and environmental irritants. Upon activation, NLRP3 engages the adapter protein ASC that in turn recruits the third inflammasome component, the protease caspase-1. Subsequent caspase-1 activation leads to its auto-processing and maturation of the leaderless IL-1 family cytokines IL-1β and IL-18 as well as cleavage of the pore-forming protein Gasdermin D (GSDMD). GSDMD plasma membrane pores, formed by its N-terminus, facilitate IL-1 release and, typically, subsequent cell lysis (pyroptosis). This protocol explains standard methods, which are routinely used in our laboratory to study NLRP3 inflammasome biology in vitro. It includes experimental approaches using primary murine bone marrow-derived macrophages (BMDMs) and bone marrow-derived dendritic cells (BMDCs), human peripheral blood mononuclear cells (PBMCs), as well as inflammasome-competent cell lines (HoxB8 and THP-1 cells). The protocol covers the use of a broad spectrum of established NLRP3 activators and outlines the use of common inhibitors blocking NLRP3 itself or its upstream triggering events. We also provide guidelines for experimental set-up and crucial experimental controls to investigate NLRP3 inflammasome signaling or study new activators and inhibitors.
胞质模式识别受体 NLRP3(NACHT、LRR 和 PYD 结构域包含蛋白 3,也称为 NOD 样受体吡咯结构域包含蛋白 3、NALP3 或冷诱导 RNA 结合蛋白 3)被广泛的内源性无菌危险信号和环境刺激物激活。NLRP3 激活后,与衔接蛋白 ASC 结合,后者招募第三个炎症小体成分半胱氨酸蛋白酶-1(caspase-1)。随后 caspase-1 的激活导致其自身加工和无领导的白细胞介素(IL)家族细胞因子 IL-1β 和 IL-18 的成熟,以及孔形成蛋白 Gasdermin D(GSDMD)的切割。GSDMD 细胞膜孔由其 N 端形成,促进 IL-1 的释放,通常随后导致细胞裂解(细胞焦亡)。本方案介绍了我们实验室常规用于体外研究 NLRP3 炎症小体生物学的标准方法。它包括使用原代小鼠骨髓来源的巨噬细胞(BMDMs)和骨髓来源的树突状细胞(BMDCs)、人外周血单核细胞(PBMCs)以及炎症小体活性细胞系(HoxB8 和 THP-1 细胞)的实验方法。该方案涵盖了广泛使用的已建立的 NLRP3 激活剂,并概述了使用常见抑制剂阻断 NLRP3 本身或其上游触发事件的方法。我们还提供了实验设置和关键实验对照的指南,以研究 NLRP3 炎症小体信号或研究新的激活剂和抑制剂。