Department of Biology, University of York, York, YO10 5DD, UK.
York Biomedical Research Institute, University of York, York, UK.
BMC Biol. 2023 Aug 15;21(1):175. doi: 10.1186/s12915-023-01671-6.
Cip1-interacting zinc finger protein 1 (CIZ1) forms RNA-dependent protein assemblies that stabilise epigenetic state, notable at the inactive X chromosome in females. CIZ1 has been linked with a range of human cancers and in mice genetic deletion of CIZ1 manifests as hyperproliferative lymphoid lineages in females. This suggests that its role in maintenance of epigenetic stability is linked with disease.
Here, we show that male and female CIZ1-null primary murine fibroblasts have reduced H4K20me1 and that this compromises nuclear condensation on entry to quiescence. Global transcriptional repression remains intact in condensation-deficient CIZ1-null cells; however, a subset of genes linked with chromatin condensation and homology-directed DNA repair are perturbed. Failure to condense is phenotypically mimicked by manipulation of the H4K20me1 methyltransferase, SET8, in WT cells and partially reverted in CIZ1-null cells upon re-expression of CIZ1. Crucially, during exit from quiescence, nuclear decondensation remains active, so that repeated entry and exit cycles give rise to expanded nuclei susceptible to mechanical stress, DNA damage checkpoint activation, and downstream emergence of transformed proliferative colonies.
Our results demonstrate a role for CIZ1 in chromatin condensation on entry to quiescence and explore the consequences of this defect in CIZ1-null cells. Together, the data show that CIZ1's protection of the epigenome guards against genome instability during quiescence cycles. This identifies loss of CIZ1 as a potentially devastating vulnerability in cells that undergo cycles of quiescence entry and exit.
Cip1 相互作用锌指蛋白 1(CIZ1)形成 RNA 依赖性蛋白组装体,稳定表观遗传状态,在女性的失活 X 染色体上尤为明显。CIZ1 与多种人类癌症有关,在小鼠中,CIZ1 的基因缺失表现为女性中过度增殖的淋巴谱系。这表明其在维持表观遗传稳定性中的作用与疾病有关。
在这里,我们表明雄性和雌性 CIZ1 缺失的原代小鼠成纤维细胞中 H4K20me1 减少,这会影响进入静止期时的核浓缩。在缺乏 CIZ1 的细胞中,全基因组转录抑制仍然完整;然而,与染色质浓缩和同源定向 DNA 修复相关的一部分基因受到干扰。在 WT 细胞中通过操纵 H4K20me1 甲基转移酶 SET8 来模拟无法浓缩的表型,并且在 CIZ1 缺失的细胞中重新表达 CIZ1 后部分恢复。至关重要的是,在退出静止期时,核去浓缩仍然活跃,因此重复进入和退出周期会导致扩大的细胞核容易受到机械应力、DNA 损伤检查点激活以及随后出现转化性增殖菌落的影响。
我们的结果表明 CIZ1 在进入静止期时在染色质浓缩中起作用,并探讨了 CIZ1 缺失细胞中这种缺陷的后果。总之,这些数据表明 CIZ1 对表观基因组的保护防止了静止周期期间的基因组不稳定性。这表明 CIZ1 的缺失可能是经历静止期进入和退出周期的细胞的毁灭性脆弱性。