Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.
Bionanotechnology Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125 Gwahak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.
Mater Horiz. 2023 Oct 2;10(10):4571-4580. doi: 10.1039/d3mh00861d.
The recent outbreak of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has highlighted the need for rapid, user-friendly nucleic acid testing that involves simple but efficient RNA extraction. Here, we present a charge-shifting polyplex as an RNA extraction carrier for advanced diagnosis of infectious viral diseases. The polyplex comprises poly(2-(dimethylamino) ethyl acrylate) (pDMAEA) electrostatically conjugated with RNA. The pDMAEA film can rapidly dissolve in the viral RNA solution, promoting immediate binding with RNA to form the polyplex, which enables the efficient capture of a substantial quantity of RNA. Subsequently, the captured RNA can be readily released by the quick hydrolysis of pDMAEA at the onset of quantitative reverse transcription-polymerase chain reaction (qRT-PCR), streamlining the entire process from RNA extraction to analysis. The developed method requires only 5 min of centrifugation and enables the detection of RNA in a one-pot setup. Moreover, the proposed method is fully compatible with high-speed qRT-PCR kits and can identify clinical samples within 1 h including the entire extraction to detection procedure. Indeed, the method successfully detected influenza viruses, SARS-CoV-2, and their delta and omicron variants in 260 clinical samples with a sensitivity of 99.4% and specificity of 98.9%. This rapid, user-friendly polyplex-based approach represents a significant breakthrough in molecular diagnostics.
最近严重急性呼吸综合征冠状病毒 2 (SARS-CoV-2) 的爆发突出表明需要快速、用户友好的核酸检测,该检测涉及简单但高效的 RNA 提取。在这里,我们提出了一种电荷转移聚集体作为用于传染病病毒先进诊断的 RNA 提取载体。该聚集体由聚(2-(二甲氨基)乙基丙烯酰胺)(pDMAEA)静电结合 RNA 组成。pDMAEA 薄膜可迅速溶解在病毒 RNA 溶液中,促进与 RNA 的立即结合形成聚集体,从而能够高效捕获大量 RNA。随后,通过在定量逆转录聚合酶链反应 (qRT-PCR) 开始时快速水解 pDMAEA,可轻易释放捕获的 RNA,简化了从 RNA 提取到分析的整个过程。所开发的方法仅需要 5 分钟的离心,并且能够在一个小瓶中检测 RNA。此外,所提出的方法与高速 qRT-PCR 试剂盒完全兼容,可以在 1 小时内识别临床样本,包括整个提取到检测过程。实际上,该方法成功地在 260 个临床样本中检测到流感病毒、SARS-CoV-2 及其 delta 和 omicron 变体,灵敏度为 99.4%,特异性为 98.9%。这种快速、用户友好的基于聚集体的方法是分子诊断方面的重大突破。