• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

阿杰利蒙酵母属(Ajellomyces dermatitidis)亚胺还原酶在三种晶体形式下的结构。

Structure of the imine reductase from Ajellomyces dermatitidis in three crystal forms.

机构信息

Department of Chemistry, University of York, Heslington, York YO10 5DD, United Kingdom.

出版信息

Acta Crystallogr F Struct Biol Commun. 2023 Sep 1;79(Pt 9):224-230. doi: 10.1107/S2053230X23006672. Epub 2023 Aug 15.

DOI:10.1107/S2053230X23006672
PMID:37581897
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10478762/
Abstract

The NADPH-dependent imine reductase from Ajellomyces dermatitidis (AdRedAm) catalyzes the reductive amination of certain ketones with amine donors supplied in an equimolar ratio. The structure of AdRedAm has been determined in three forms. The first form, which belongs to space group P321 and was refined to 2.01 Å resolution, features two molecules (one dimer) in the asymmetric unit in complex with the redox-inactive cofactor NADPH. The second form, which belongs to space group C2 and was refined to 1.73 Å resolution, has nine molecules (four and a half dimers) in the asymmetric unit, each complexed with NADP. The third form, which belongs to space group P321 and was refined to 1.52 Å resolution, has one molecule (one half-dimer) in the asymmetric unit. This structure was again complexed with NADP and also with the substrate 2,2-difluoroacetophenone. The different data sets permit the analysis of AdRedAm in different conformational states and also reveal the molecular basis of stereoselectivity in the transformation of fluorinated acetophenone substrates by the enzyme.

摘要

青霉菌(Ajellomyces dermatitidis)中的 NADPH 依赖型亚胺还原酶(AdRedAm)能够以等摩尔比的方式,催化某些酮类化合物与胺供体的还原胺化反应。AdRedAm 的结构已通过三种形式确定。第一种形式属于 P321 空间群,其分辨率被精细到 2.01Å,在不对称单元中包含两个分子(一个二聚体),与氧化还原非活性辅因子 NADPH 形成复合物。第二种形式属于 C2 空间群,其分辨率精细到 1.73Å,在不对称单元中包含九个分子(四个半二聚体),每个分子都与 NADP 形成复合物。第三种形式属于 P321 空间群,其分辨率精细到 1.52Å,在不对称单元中仅包含一个分子(一个半二聚体)。该结构再次与 NADP 以及底物 2,2-二氟苯乙酮形成复合物。不同的数据集合允许对 AdRedAm 在不同构象状态下进行分析,也揭示了酶对氟代苯乙酮底物进行立体选择性转化的分子基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/631c/10478762/8ca77702c30c/f-79-00224-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/631c/10478762/0efdcf377e87/f-79-00224-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/631c/10478762/f3a091d1483b/f-79-00224-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/631c/10478762/8ca77702c30c/f-79-00224-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/631c/10478762/0efdcf377e87/f-79-00224-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/631c/10478762/f3a091d1483b/f-79-00224-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/631c/10478762/8ca77702c30c/f-79-00224-fig3.jpg

相似文献

1
Structure of the imine reductase from Ajellomyces dermatitidis in three crystal forms.阿杰利蒙酵母属(Ajellomyces dermatitidis)亚胺还原酶在三种晶体形式下的结构。
Acta Crystallogr F Struct Biol Commun. 2023 Sep 1;79(Pt 9):224-230. doi: 10.1107/S2053230X23006672. Epub 2023 Aug 15.
2
Structure and activity of NADPH-dependent reductase Q1EQE0 from Streptomyces kanamyceticus, which catalyses the R-selective reduction of an imine substrate.链霉菌属中依赖 NADPH 的还原酶 Q1EQE0 的结构与活性,该酶能催化亚胺底物的 R-选择性还原。
Chembiochem. 2013 Jul 22;14(11):1372-9. doi: 10.1002/cbic.201300321. Epub 2013 Jun 28.
3
Structural Characterization of an -enantioselective Imine Reductase from .对. 的一种对映选择性亚胺还原酶的结构特征分析。
Biomolecules. 2020 Jul 31;10(8):1130. doi: 10.3390/biom10081130.
4
Asymmetric Ketone Reduction by Imine Reductases.亚胺还原酶催化的不对称酮还原反应
Chembiochem. 2017 Feb 1;18(3):253-256. doi: 10.1002/cbic.201600647. Epub 2016 Dec 30.
5
Recent advances in imine reductase-catalyzed reactions.亚胺还原酶催化反应的最新进展。
World J Microbiol Biotechnol. 2017 Oct 11;33(11):199. doi: 10.1007/s11274-017-2365-8.
6
Evidence of a sequestered imine intermediate during reduction of nitrile to amine by the nitrile reductase QueF from .腈还原酶 QueF 还原腈为胺时亚胺中间产物的证据。
J Biol Chem. 2018 Mar 9;293(10):3720-3733. doi: 10.1074/jbc.M117.804583. Epub 2018 Jan 16.
7
Crystallization and preliminary X-ray analysis of 5-keto-D-gluconate reductase from Gluconobacter suboxydans IFO12528 complexed with 5-keto-D-gluconate and NADPH.氧化葡萄糖酸杆菌IFO12528的5-酮-D-葡萄糖酸还原酶与5-酮-D-葡萄糖酸和NADPH复合物的结晶及初步X射线分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Dec 1;66(Pt 12):1680-2. doi: 10.1107/S1744309110043617. Epub 2010 Nov 27.
8
Ajellomyces crescens sp. nov., taxonomy of Emmonsia spp., and relatedness with Blastomyces dermatitidis (teleomorph Ajellomyces dermatitidis).新月阿耶洛霉新种、埃蒙斯霉属的分类学以及与皮炎芽生菌(有性型:皮炎阿耶洛霉)的亲缘关系
J Med Vet Mycol. 1996 Sep-Oct;34(5):303-14.
9
Structural insights into the cofactor-assisted substrate recognition of yeast methylglyoxal/isovaleraldehyde reductase Gre2.酵母甲基乙二醛/异戊醛还原酶Gre2辅因子辅助底物识别的结构见解
Biochim Biophys Acta. 2014 Sep;1844(9):1486-92. doi: 10.1016/j.bbapap.2014.05.008. Epub 2014 May 27.
10
Reductive amination of ketones catalyzed by whole cell biocatalysts containing imine reductases (IREDs).含亚胺还原酶(IREDs)的全细胞生物催化剂催化酮的还原胺化反应。
J Biotechnol. 2017 Sep 20;258:167-170. doi: 10.1016/j.jbiotec.2017.05.015. Epub 2017 May 22.

本文引用的文献

1
A Reductive Aminase Switches to Imine Reductase Mode for a Bulky Amine Substrate.一种还原胺化酶针对庞大的胺底物转变为亚胺还原酶模式。
ACS Catal. 2023 Jan 12;13(3):1669-1677. doi: 10.1021/acscatal.2c06066. eCollection 2023 Feb 3.
2
Actinomycetes-derived imine reductases with a preference towards bulky amine substrates.对体积较大的胺底物具有偏好性的放线菌来源的亚胺还原酶。
Commun Chem. 2022 Oct 8;5(1):123. doi: 10.1038/s42004-022-00743-y.
3
Reductive aminations by imine reductases: from milligrams to tons.亚胺还原酶催化的还原胺化反应:从毫克到吨级规模
Chem Sci. 2022 Apr 7;13(17):4697-4713. doi: 10.1039/d2sc00124a. eCollection 2022 May 4.
4
Dali server: structural unification of protein families.达尔服务器:蛋白质家族的结构统一。
Nucleic Acids Res. 2022 Jul 5;50(W1):W210-W215. doi: 10.1093/nar/gkac387.
5
Engineering of Reductive Aminases for Asymmetric Synthesis of Enantiopure Rasagiline.用于对映体纯雷沙吉兰不对称合成的还原胺酶工程
Front Bioeng Biotechnol. 2021 Dec 22;9:798147. doi: 10.3389/fbioe.2021.798147. eCollection 2021.
6
Asymmetric synthesis of primary amines catalyzed by thermotolerant fungal reductive aminases.耐热真菌还原氨基酶催化的伯胺不对称合成
Chem Sci. 2020 May 5;11(19):5052-5057. doi: 10.1039/d0sc02253e.
7
Engineering Promiscuous Alcohol Dehydrogenase Activity of a Reductive Aminase RedAm for Selective Reduction of Biobased Furans.通过工程改造还原胺酶RedAm的混杂乙醇脱氢酶活性实现对生物基呋喃的选择性还原
Front Chem. 2021 May 13;9:610091. doi: 10.3389/fchem.2021.610091. eCollection 2021.
8
carba Nicotinamide Adenine Dinucleotide Phosphate: Robust Cofactor for Redox Biocatalysis.Carba Nicotinamide Adenine Dinucleotide Phosphate: 氧化还原生物催化的稳健辅因子。
Angew Chem Int Ed Engl. 2021 Jun 21;60(26):14701-14706. doi: 10.1002/anie.202017027. Epub 2021 May 10.
9
Reductive Amination in the Synthesis of Pharmaceuticals.还原胺化反应在药物合成中的应用。
Chem Rev. 2019 Dec 11;119(23):11857-11911. doi: 10.1021/acs.chemrev.9b00383. Epub 2019 Oct 21.
10
Biocatalytic N-Alkylation of Amines Using Either Primary Alcohols or Carboxylic Acids via Reductive Aminase Cascades.通过还原酶级联反应,使用伯醇或羧酸对胺进行生物催化 N-烷基化。
J Am Chem Soc. 2019 Jan 23;141(3):1201-1206. doi: 10.1021/jacs.8b11561. Epub 2019 Jan 8.