Department of Intelligence Science and Technology, Graduate School of Informatics, Kyoto University, Kyoto, Japan.
International Institute for Zoonosis Control, Division of Bioinformatics, Hokkaido University, Hokkaido, Japan.
PLoS One. 2023 Aug 16;18(8):e0289568. doi: 10.1371/journal.pone.0289568. eCollection 2023.
We propose a new method for bipartite link prediction using matrix factorization with negative sample selection. Bipartite link prediction is a problem that aims to predict the missing links or relations in a bipartite network. One of the most popular solutions to the problem is via matrix factorization (MF), which performs well but requires reliable information on both absent and present network links as training samples. This, however, is sometimes unavailable since there is no ground truth for absent links. To solve the problem, we propose a technique called negative sample selection, which selects reliable negative training samples using formal concept analysis (FCA) of a given bipartite network in advance of the preceding MF process. We conduct experiments on two hypothetical application scenarios to prove that our joint method outperforms the raw MF-based link prediction method as well as all other previously-proposed unsupervised link prediction methods.
我们提出了一种新的使用负样本选择的矩阵分解进行二分图链路预测的方法。二分图链路预测是一个旨在预测二分图中缺失链路或关系的问题。解决这个问题的最流行的方法之一是通过矩阵分解(MF),它的性能很好,但需要可靠的信息,无论是缺席和现在的网络链接作为训练样本。然而,这在某些情况下是不可用的,因为不存在缺失链接的真实信息。为了解决这个问题,我们提出了一种称为负样本选择的技术,它使用形式概念分析(FCA)预先选择给定二分图的可靠负训练样本,然后再进行前面的 MF 过程。我们在两个假设的应用场景中进行实验,证明我们的联合方法优于原始基于 MF 的链路预测方法以及所有其他以前提出的无监督链路预测方法。