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一种新型的二硫键相关的糖酵解相关风险评分特征,用于预测结直肠癌的预后和免疫检查点抑制剂治疗反应。

A novel disulfidptosis and glycolysis related risk score signature for prediction of prognosis and ICI therapeutic responsiveness in colorectal cancer.

机构信息

Department of Gastrointestinal Surgery, Renmin Hospital of Wuhan University, Wuhan, China.

出版信息

Sci Rep. 2023 Aug 16;13(1):13344. doi: 10.1038/s41598-023-40381-5.

Abstract

Disulfidptosis is a newly-identified non-programmed cell death mode with tight associations with glucose metabolism. Elevated glycolysis is an important metabolic feature of tumor cells, which fulfills the energy requirement for their rapid growth and progression. Our present study determined to develop a disulfidptosis and glycolysis related gene (DGRG) risk score signature to predict the prognosis and ICI therapeutic responsiveness for CRC patients. First, the gene expression and clinical profiles for CRC patients were obtained from TCGA and GEO database. Using weighted gene co-expression network analysis, we identified hub genes showing the strongest correlations with both disulfidptosis and glycolysis activities. Next, a DGRG risk score signature was successfully developed through univariate and least absolute shrinkage and selection operator method Cox regression method. A DGRG risk score-based nomogram could further enhance the predictive performance. In addition, an array of systemic analysis was performed to unravel the correlation of DGRG risk score with tumor microenvironment. The results showed that CRC patients with low DGRG risk level had up-regulated immune cell infiltrations, enhanced metabolic activities and heightened gene mutation frequencies, while high risk patients was the opposite. Moreover, our present study identified low risk CRC patients as potential beneficiaries from immune checkpoint inhibitor (ICI) therapies. Our present work highlighted the potential utility of DGRG risk score signature in prognosis prediction and ICI responsiveness determination for CRC patients, which demonstrated promising clinical application value.

摘要

二硫键程序性细胞死亡是一种新发现的非程序性细胞死亡方式,与葡萄糖代谢密切相关。糖酵解是肿瘤细胞的重要代谢特征,满足了其快速生长和进展的能量需求。我们目前的研究旨在开发一种与二硫键程序性细胞死亡和糖酵解相关的基因(DGRG)风险评分特征,以预测 CRC 患者的预后和免疫检查点抑制剂(ICI)治疗反应性。首先,从 TCGA 和 GEO 数据库中获取 CRC 患者的基因表达和临床资料。通过加权基因共表达网络分析,我们鉴定出与二硫键程序性细胞死亡和糖酵解活性均具有最强相关性的枢纽基因。接下来,通过单变量和最小绝对值收缩和选择算子法 Cox 回归方法成功开发了 DGRG 风险评分特征。基于 DGRG 风险评分的列线图可以进一步提高预测性能。此外,还进行了一系列系统分析,以揭示 DGRG 风险评分与肿瘤微环境的相关性。结果表明,DGRG 风险水平低的 CRC 患者具有上调的免疫细胞浸润、增强的代谢活性和升高的基因突变频率,而高风险患者则相反。此外,本研究确定低风险 CRC 患者可能是免疫检查点抑制剂(ICI)治疗的潜在获益者。本研究强调了 DGRG 风险评分特征在 CRC 患者预后预测和 ICI 反应性判断中的潜在应用价值,具有广阔的临床应用前景。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e4cd/10432503/f5eab27f888f/41598_2023_40381_Fig1_HTML.jpg

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