Suppr超能文献

鉴定甲状腺癌中关于预后和免疫景观的独特二硫键病分类,并提供治疗策略。

Identification a unique disulfidptosis classification regarding prognosis and immune landscapes in thyroid carcinoma and providing therapeutic strategies.

机构信息

Department of Endocrinology, Shuyang County Hospital of Traditional Chinese Medicine, Suqian, 223600, Jiangsu, China.

出版信息

J Cancer Res Clin Oncol. 2023 Oct;149(13):11157-11170. doi: 10.1007/s00432-023-05006-4. Epub 2023 Jun 22.

Abstract

BACKGROUND

Thyroid carcinoma (THCA) is a common type of cancer worldwide, and its incidence has been increasing in recent years. Disulfidptosis, a recently defined form of metabolic-related regulated cell death (RCD), has been shown to play a sophisticated role in antitumor immunity. However, its mechanisms and functions are still poorly understood and the association between disulfidptosis and the prognosis of patients with papillary thyroid carcinoma remains to be elucidated. This study aims to investigate the connection between disulfidptosis and the prognosis of thyroid cancer, while also developing a prognostic index based on disulfidptosis genes.

MATERIALS AND METHODS

We utilized 24 genes associated with disulfidptosis to create the classification and model. To gather data, we sourced gene expression profiles, somatic mutation information, copy number variation data, and corresponding clinical data from the TCGA database for patients with thyroid cancer. Additionally, we obtained single-cell transcriptome data GSE184362 from the Gene Expression Omnibus (GEO) database for further analysis.

RESULTS

In this study, we utilized 24 genes associated with disulfidptosis to identify two distinct groups with different biological processes using non-negative matrix factorization (NMF). Our findings showed that Cluster 1 is associated with chemokines, interleukins, interferons, checkpoint genes, and other important components of the immune microenvironment. Moreover, cluster 1 patients with high IPS scores may be more sensitive to immunotherapy. We also provide drug therapeutic strategies for each cluster patients based on the IC50 of each drug. The Enet model was chosen as the optimal model with the highest C-index and showed that patients with high risk had a worse prognosis and weak cell-to-cell interactions in THCA. Finally, we established a nomogram model based on multivariable cox and logistic regression analyses to predict the overall survival of THCA patients.

CONCLUSION

This research provides new insight into the impact of disulfidptosis on THCA. Through a thorough examination of disulfidptosis, a new classification system has been developed that can effectively predict the clinical prognosis and drug sensitivity of THCA patients.

摘要

背景

甲状腺癌(THCA)是一种常见的癌症类型,在世界范围内发病率呈上升趋势。硫醚化凋亡是一种新定义的代谢相关调控细胞死亡(RCD)形式,它在抗肿瘤免疫中起着复杂的作用。然而,其机制和功能仍知之甚少,硫醚化凋亡与甲状腺癌患者预后之间的关系仍有待阐明。本研究旨在探讨硫醚化凋亡与甲状腺癌预后之间的关系,并基于硫醚化凋亡基因建立预后指标。

材料和方法

我们利用与硫醚化凋亡相关的 24 个基因构建分类和模型。为了收集数据,我们从 TCGA 数据库中获取了甲状腺癌患者的基因表达谱、体细胞突变信息、拷贝数变异数据和相应的临床数据。此外,我们还从基因表达综合数据库(GEO)中获取了 GSE184362 单细胞转录组数据进行进一步分析。

结果

在本研究中,我们利用与硫醚化凋亡相关的 24 个基因,通过非负矩阵分解(NMF)识别出具有不同生物学过程的两个不同亚群。我们的研究结果表明,簇 1 与趋化因子、白细胞介素、干扰素、检查点基因和免疫微环境的其他重要组成部分有关。此外,IPS 评分较高的簇 1 患者可能对免疫治疗更敏感。我们还根据每种药物的 IC50 为每个亚群患者提供了药物治疗策略。Enet 模型被选为最佳模型,具有最高的 C 指数,表明高危患者的 THCA 预后较差,细胞间相互作用较弱。最后,我们基于多变量 cox 和逻辑回归分析建立了一个列线图模型,以预测 THCA 患者的总生存率。

结论

这项研究为硫醚化凋亡对 THCA 的影响提供了新的见解。通过对硫醚化凋亡的全面研究,建立了一种新的分类系统,可以有效地预测 THCA 患者的临床预后和药物敏感性。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验