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2016 年世卫组织中枢神经系统肿瘤分类指南诊断的 661 例青年胶质母细胞瘤的回顾性基因组图谱。

A Retrospective Genomic Landscape of 661 Young Adult Glioblastomas Diagnosed Using 2016 WHO Guidelines for Central Nervous System Tumors.

机构信息

Pathology Department, Foundation Medicine, Morrisville, NC, USA.

Pathology Department, Foundation Medicine, Cambridge, MA, USA.

出版信息

Oncologist. 2024 Jan 5;29(1):e47-e58. doi: 10.1093/oncolo/oyad224.

DOI:10.1093/oncolo/oyad224
PMID:37619245
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10769808/
Abstract

The authors present a cohort of 661 young adult glioblastomas diagnosed using 2016 WHO World Health Organization Classification of Tumors of the Central Nervous System, utilizing comprehensive genomic profiling (CGP) to explore their genomic landscape and assess their relationship to currently defined disease entities. This analysis explored variants with evidence of pathogenic function, common copy number variants (CNVs), and several novel fusion events not described in literature. Tumor mutational burden (TMB) mutational signatures, anatomic location, and tumor recurrence are further explored. Using data collected from CGP, unsupervised machine-learning techniques were leveraged to identify 10 genomic classes in previously assigned young adult glioblastomas. The authors relate these molecular classes to current World Health Organization guidelines and reference current literature to give therapeutic and prognostic descriptions where possible.

摘要

作者报告了一组使用 2016 年世界卫生组织中枢神经系统肿瘤分类诊断的 661 例年轻成人胶质母细胞瘤,利用全面基因组分析 (CGP) 来探索其基因组图谱,并评估其与目前定义的疾病实体的关系。该分析探讨了具有致病性功能证据的变异、常见拷贝数变异 (CNV) 和一些文献中未描述的新融合事件。肿瘤突变负担 (TMB) 突变特征、解剖位置和肿瘤复发也进一步进行了研究。利用从 CGP 收集的数据,使用无监督机器学习技术在先前分配的年轻成人胶质母细胞瘤中识别出 10 个基因组类别。作者将这些分子类别与当前的世界卫生组织指南相关联,并参考当前的文献,尽可能给出治疗和预后描述。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/70f254ce8ec3/oyad224_fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/a4db195a02c2/oyad224_fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/d1227bb3a40c/oyad224_fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/672fe723c4b8/oyad224_fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/ee8b1803d8a0/oyad224_fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/3575625e5d08/oyad224_fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/70f254ce8ec3/oyad224_fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/a4db195a02c2/oyad224_fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/d1227bb3a40c/oyad224_fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/672fe723c4b8/oyad224_fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/ee8b1803d8a0/oyad224_fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/3575625e5d08/oyad224_fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a42/10769808/70f254ce8ec3/oyad224_fig6.jpg

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本文引用的文献

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Neuro Oncol. 2021 Aug 2;23(8):1231-1251. doi: 10.1093/neuonc/noab106.
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FoundationOne CDx testing accurately determines whole arm 1p19q codeletion status in gliomas.FoundationOne CDx检测可准确确定胶质瘤中1号染色体短臂1区1带和19号染色体长臂共缺失状态。
Neurooncol Adv. 2021 Feb 4;3(1):vdab017. doi: 10.1093/noajnl/vdab017. eCollection 2021 Jan-Dec.
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Glioblastomas harboring gene fusions detected by next-generation sequencing.
胶质瘤患者的基因组分析以探索临床相关标志物
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Mechanisms and therapeutic implications of hypermutation in gliomas.胶质母细胞瘤中突变的机制及治疗意义。
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Targeted next-generation sequencing of 565 neuro-oncology patients at UCLA: A single-institution experience.加州大学洛杉矶分校对565名神经肿瘤患者进行的靶向二代测序:单机构经验。
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