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对年轻队列中不明原因猝死的死后基因分析:全外显子组测序研究。

Post-mortem genetic analysis of sudden unexplained death in a young cohort: a whole-exome sequencing study.

机构信息

Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, 131 Dongan Road, Xuhui District, Shanghai, 200032, People's Republic of China.

Shanghai Key Laboratory of Crime Scene Evidence, Shanghai Public Security Bureau, Shanghai, 200083, People's Republic of China.

出版信息

Int J Legal Med. 2023 Nov;137(6):1661-1670. doi: 10.1007/s00414-023-03075-1. Epub 2023 Aug 25.

DOI:10.1007/s00414-023-03075-1
PMID:37624372
Abstract

Sudden unexplained death (SUD) constitutes a considerable portion of unexpected sudden death in the young. Molecular autopsy has proved to be an efficient diagnostic tool in the multidisciplinary management of SUD. Yet, many cases remain undiagnosed using the widely adopted targeted genetic screening strategies. Here, we investigated the genetic substrates of a young SUD cohort (18-40 years old) from China using whole-exome sequencing (WES), with the primary aim to identify novel SUD susceptibility genes. Within 255 previously acknowledged SUD-associated genes, 21 variants with likely functional effects (pathogenic/likely pathogenic) were identified in 51.9% of the SUD cases. More importantly, a set of 33 candidate genes associated with myopathy were identified to be novel susceptibility genes for SUD. Comparative analysis of the cumulative PHRED-scaled CADD score and polygenetic burden score showed that the amount and deleteriousness of variants in the 255 SUD-associated genes and the 33 candidate genes identified by this study were significantly higher compared with 289 randomly selected genes. A significantly higher genetic burden of rare variants (MAF < 0.1%) in the 33 candidate genes also highlighted putative roles of these genes in SUD. After incorporating these novel genes, the genetic testing yields of the current SUD cohort elevated from 51.9 to 66.7%. Our study expands understanding of the genetic variants underlying SUD and presents insights that improve the utility of genetic screenings.

摘要

不明原因的猝死 (SUD) 构成了年轻人中意外猝死的相当大一部分。分子尸检已被证明是 SUD 多学科管理的有效诊断工具。然而,使用广泛采用的靶向基因筛查策略,许多病例仍未得到诊断。在这里,我们使用全外显子组测序 (WES) 研究了来自中国的年轻 SUD 队列(18-40 岁)的遗传基础,主要目的是确定新的 SUD 易感基因。在 255 个先前公认的与 SUD 相关的基因中,在 51.9%的 SUD 病例中发现了 21 个具有潜在功能影响(致病性/可能致病性)的变体。更重要的是,确定了一组与肌病相关的 33 个候选基因,这些基因是 SUD 的新易感基因。对累积 PHRED 标度 CADD 评分和多基因负担评分的比较分析表明,与通过本研究确定的 255 个 SUD 相关基因和 33 个候选基因相比,255 个 SUD 相关基因和 33 个候选基因中的变体数量和有害性要高得多。33 个候选基因中罕见变异体(MAF<0.1%)的遗传负担也明显更高,这突出了这些基因在 SUD 中的潜在作用。纳入这些新基因后,当前 SUD 队列的基因检测率从 51.9%提高到 66.7%。我们的研究扩展了对 SUD 遗传基础的理解,并提供了改善遗传筛查实用性的见解。

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Forensic Sci Int. 2022 May;334:111240. doi: 10.1016/j.forsciint.2022.111240. Epub 2022 Feb 25.
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Supramolecular organization of Cytochrome-C into quantum-dot decorated macromolecular network under pH and thermal stress.在 pH 值和热应力下,细胞色素 C 形成量子点修饰的高分子网络的超分子组织。
Int J Biol Macromol. 2021 Dec 15;193(Pt B):1623-1634. doi: 10.1016/j.ijbiomac.2021.10.225. Epub 2021 Nov 4.
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Genetic investigations of 100 inherited cardiac disease-related genes in deceased individuals with schizophrenia.
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Int J Legal Med. 2021 Jul;135(4):1395-1405. doi: 10.1007/s00414-021-02595-y. Epub 2021 May 11.
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