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RECQ家族在泛癌中的表达特征与功能

The Expression Characteristics and Function of the RECQ Family in Pan-Cancer.

作者信息

Zhou Yuanyuan, Huang Xucheng, Wang Liya, Luo Yujia

机构信息

Department of Reproductive Endocrinology, Women's Hospital, School of Medicine, Zhejiang University, Hangzhou 310003, China.

Department of Clinical Laboratory, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou 310016, China.

出版信息

Biomedicines. 2023 Aug 21;11(8):2318. doi: 10.3390/biomedicines11082318.

Abstract

BACKGROUND

The genes of the RECQ DNA helicase family play a part in preserving the stability of the genome and controlling different disease mechanisms. However, the expression features of RECQs in relation to pan-cancer, their correlation with the immune microenvironment of tumors, and the landscape of prognostic power are still undisclosed.

METHODS

Various sequence and clinical data extracted from 33 cancers were utilized to generate a comprehensive overview of RECQs in the landscape. Afterward, we discovered variations in gene expression, potential enrichment of functions, genetic alterations, and analysis related to the immune response in tumors. Additionally, we explored the clinical characteristics and diagnostic significance of RECQs. And the important association of RECQL4 with liver hepatocellular carcinoma (LIHC) was investigated.

RESULTS

RECQs exhibited extensive mutations in different types of cancers. The expression of RECQ may be influenced by an oncogenic mutation in certain types of cancer, resulting in the observed genomic and epigenetic changes in diverse tumor formations. Furthermore, RECQs originating from tumors exhibited a significant association with the immune microenvironment of the tumor, indicating their potential as promising targets for therapy. Patient prognosis was significantly associated with the majority of genes in the RECQ family. In LIHC, RECQL4 eventually emerged as a separate prognostic determinant.

CONCLUSIONS

To summarize, RECQs are essential for the regulation of the immune system in tumors, and RECQL4 serves as a prognostic indicator in LIHC. The results of our study offer fresh perspectives on RECQs from a bioinformatics perspective and emphasize the importance of RECQs in the diagnosis and treatment of cancer.

摘要

背景

RECQ DNA解旋酶家族的基因在维持基因组稳定性和控制不同疾病机制中发挥作用。然而,RECQs在泛癌中的表达特征、它们与肿瘤免疫微环境的相关性以及预后能力的情况仍未明确。

方法

利用从33种癌症中提取的各种序列和临床数据,对RECQs在全景中的情况进行全面概述。随后,我们发现了基因表达的变化、潜在的功能富集、基因改变以及与肿瘤免疫反应相关的分析。此外,我们还探讨了RECQs的临床特征和诊断意义。并研究了RECQL4与肝细胞癌(LIHC)的重要关联。

结果

RECQs在不同类型的癌症中表现出广泛的突变。RECQ的表达可能受某些类型癌症中致癌突变的影响,导致在不同肿瘤形成中观察到基因组和表观遗传变化。此外,源自肿瘤的RECQs与肿瘤免疫微环境存在显著关联,表明它们作为有前景的治疗靶点的潜力。患者预后与RECQ家族中的大多数基因显著相关。在LIHC中,RECQL4最终成为一个独立的预后决定因素。

结论

总之,RECQs对肿瘤免疫系统的调节至关重要,而RECQL4在LIHC中作为预后指标。我们的研究结果从生物信息学角度为RECQs提供了新的视角,并强调了RECQs在癌症诊断和治疗中的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f095/10452384/e4de294717d0/biomedicines-11-02318-g001.jpg

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