Belinskaia Daria A, Voronina Polina A, Krivorotov Denis V, Jenkins Richard O, Goncharov Nikolay V
Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, Thorez 44, St. Petersburg 194223, Russia.
Research Institute of Hygiene, Occupational Pathology and Human Ecology, Federal Medical Biological Agency, p.o. Kuzmolovsky, St. Petersburg 188663, Russia.
Pharmaceutics. 2023 Aug 19;15(8):2159. doi: 10.3390/pharmaceutics15082159.
The etiology and pathogenesis of Alzheimer's disease are multifactorial, so one of the treatment strategies is the development of the drugs that affect several targets associated with the pathogenesis of the disease. Within this roadmap, we investigated the interaction of several substituted 1,3-dihydro-2-oxo-1-benzimidazol-2-ones with their potential molecular targets: cholinesterases (ChE) and three types of the G-protein-coupled serotonin receptors (5-HTR) 5-HT, 5-HT and 5-HT (5-HTR, 5-HTR and 5-HTR, respectively). A microplate modification of the Ellman method was used for the biochemical analysis of the inhibitory ability of the drugs towards ChE. Molecular modeling methods, such as molecular docking and molecular dynamics (MD) simulation in water and the lipid bilayer, were used to study the interaction of the compounds with ChE and 5-HTR. In vitro experiments showed that the tested compounds had moderate anticholinesterase activity. With the help of molecular modeling methods, the mechanism of interaction of the tested compounds with ChE was investigated, the binding sites were described and the structural features of the drugs that determine the strength of their anticholinesterase activity were revealed. Primary in silico evaluation showed that benzimidazole-carboxamides effectively bind to 5-HTR and 5-HTR. The pool of the obtained data allows us to choose N-[2-(diethylamino)ethyl]-2-oxo-3-(tert-butyl)-2,3-dihydro-1-benzimidazole-1-carboxamide hydrochloride (compound ) as the most promising for further experimental development.
阿尔茨海默病的病因和发病机制是多因素的,因此治疗策略之一是开发影响与该疾病发病机制相关的多个靶点的药物。在这个路线图中,我们研究了几种取代的1,3 - 二氢 - 2 - 氧代 - 1 - 苯并咪唑 - 2 - 酮与其潜在分子靶点的相互作用:胆碱酯酶(ChE)和三种类型的G蛋白偶联血清素受体(5 - HTR)5 - HT1、5 - HT2和5 - HT7(分别为5 - HT1R、5 - HT2R和5 - HT7R)。采用改良的微孔板埃尔曼法对药物对ChE的抑制能力进行生化分析。利用分子对接和水相及脂质双分子层中的分子动力学(MD)模拟等分子建模方法研究化合物与ChE和5 - HT受体的相互作用。体外实验表明,受试化合物具有中等抗胆碱酯酶活性。借助分子建模方法,研究了受试化合物与ChE的相互作用机制,描述了结合位点,并揭示了决定其抗胆碱酯酶活性强度的药物结构特征。初步的计算机模拟评估表明,苯并咪唑 - 羧酰胺能有效结合5 - HT1R和5 - HT7R。所获得的数据使我们能够选择N - [2 - (二乙氨基)乙基] - 2 - 氧代 - 3 - (叔丁基) - 2,3 - 二氢 - 1 - 苯并咪唑 - 1 - 甲酰胺盐酸盐(化合物 )作为最有前景的进一步实验开发对象。