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一种高分辨率熔解方法,用于同时区分五种引起人类巴贝斯虫病的巴贝斯虫种。

A high-resolution melting approach for the simultaneous differentiation of five human babesiosis-causing Babesia species.

机构信息

State Key Laboratory for Animal Disease Control and Prevention, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Science, Lanzhou, Gansu, People's Republic of China.

The Second Hospital of Lanzhou University, Lanzhou, People's Republic of China.

出版信息

Parasit Vectors. 2023 Aug 28;16(1):299. doi: 10.1186/s13071-023-05839-5.

Abstract

BACKGROUND

Six species of apicomplexan parasites of the genus Babesia, namely B. microti, B. divergens, B. duncani, B. motasi, B. crassa-like and B. venatorum, are considered to be the primary causal agents of human babesiosis in endemic areas. These six species possess variable degrees of virulence for their primary hosts. Therefore, the accurate identification of these species is critical for the adoption of appropriate therapeutic strategies.

METHODS

We developed a real-time PCR-high-resolution melting (qPCR-HRM) approach targeting 18S ribosomal RNA gene of five Babesia spp. based on melting temperature (T) and genotype confidence percentage values. This approach was then evaluated using 429 blood samples collected from patients with a history of tick bites, 120 DNA samples mixed with plasmids and 80 laboratory-infected animal samples.

RESULTS

The sensitivity and specificity of the proposed qPCR-HRM method were 95% and 100%, respectively, and the detection limit was 1-100 copies of the plasmid with the cloned target gene. The detection level depended on the species of Babesia analyzed. The primers designed in this study ensured not only the high interspecific specificity of our proposed method but also a high versatility for different isolates from the same species worldwide. Additionally, the Tm obtained from the prepared plasmid standard is theoretically suitable for identifying isolates of all known sequences of the five Babesia species.

CONCLUSIONS

The developed detection method provides a useful tool for the epidemiological investigation of human babesiosis and pre-transfusion screening.

摘要

背景

六种微小巴贝斯虫属的血孢子虫寄生虫,即微小巴贝斯虫、分歧巴贝斯虫、杜氏巴贝斯虫、莫氏巴贝斯虫、硬蜱似巴贝斯虫和猎兔巴贝斯虫,被认为是地方性流行地区人类巴贝斯虫病的主要病原体。这六种寄生虫对其主要宿主具有不同程度的毒力。因此,准确识别这些物种对于采取适当的治疗策略至关重要。

方法

我们基于融解温度(T)和基因型置信百分比值,针对 18S 核糖体 RNA 基因,开发了一种针对五种巴贝斯虫属的实时 PCR-高分辨率熔解(qPCR-HRM)方法。然后,我们使用从有蜱叮咬史的患者采集的 429 份血液样本、120 份与质粒混合的 DNA 样本和 80 份实验室感染动物样本对该方法进行了评估。

结果

所提出的 qPCR-HRM 方法的灵敏度和特异性分别为 95%和 100%,检测限为克隆靶基因的质粒 1-100 个拷贝。检测水平取决于分析的巴贝斯虫种类。本研究设计的引物不仅确保了我们提出的方法具有高度的种间特异性,而且还具有高度的通用性,可用于来自全球同一物种的不同分离株。此外,从制备的质粒标准获得的 Tm 理论上适合鉴定所有已知的五种巴贝斯虫种的序列的分离株。

结论

所开发的检测方法为人类巴贝斯虫病的流行病学调查和输血前筛查提供了有用的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8cf/10463647/e9db465d83c6/13071_2023_5839_Fig1_HTML.jpg

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