Hall Grant, Kelly Sarah, Schaap Pauline, Schilde Christina
School of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK.
Centre for Inflammation Research, University of Edinburgh, Edinburgh, EH16 4TJ, UK.
Open Res Eur. 2023 Feb 15;2:134. doi: 10.12688/openreseurope.15250.2. eCollection 2022.
G-protein coupled receptors (GPCRs) are seven-transmembrane proteins and constitute the largest group of receptors within eukaryotes. The presence of a large set of GPCRs in the unicellular Amoebozoa was surprising and is indicative of the largely undiscovered environmental sensing capabilities in this group. Evolutionary transitions from unicellular to multicellular lifestyles, like we see in social amoebas, have occurred several times independently in the Amoebozoa, and GPCRs may have been co-opted for new functions in cell-cell communication. Methods We have analysed a set of GPCRs from fully sequenced Amoebozoan genomes by Bayesian inference, compared their phylogenetic distribution and domain composition, and analysed their temporal and spatial expression patterns in five species of dictyostelids. Results We found evidence that most GPCRs are conserved deeply in the Amoebozoa and are probably performing roles in general cell functions and complex environmental sensing. All families of GPCRs (apart from the family 4 fungal pheromone receptors) are present in dictyostelids with family 5 being the largest and family 2 the one with the fewest members. For the first time, we identify the presence of family 1 rhodopsin-like GPCRs in dictyostelids. Some GPCRs have been amplified in the dictyostelids and in specific lineages thereof and through changes in expression patterns may have been repurposed for signalling in multicellular development. Discussion Our phylogenetic analysis suggests that GPCR families 1, 2 and 6 already diverged early in the Amoebozoa, whereas families 3 and 5 expanded later within the dictyostelids. The family 6 cAMP receptors that have experimentally supported roles in multicellular development in dictyostelids ( ; ) originated at the root of all dictyostelids and only have weakly associated homologs in Our analysis identified candidate GPCRs which have evolved in the dictyostelids and could have been co-opted for multicellular development.
G蛋白偶联受体(GPCRs)是七跨膜蛋白,是真核生物中最大的受体家族。单细胞变形虫中存在大量GPCRs,这一现象令人惊讶,表明该类群中存在大量未被发现的环境感知能力。从单细胞到多细胞生活方式的进化转变,就像我们在社会性变形虫中看到的那样,在变形虫纲中已经独立发生了好几次,GPCRs可能已经被用于细胞间通讯的新功能。方法 我们通过贝叶斯推断分析了一组来自全序列变形虫基因组的GPCRs,比较了它们的系统发育分布和结构域组成,并分析了它们在五种盘基网柄菌中的时空表达模式。结果 我们发现证据表明,大多数GPCRs在变形虫纲中高度保守,可能在一般细胞功能和复杂的环境感知中发挥作用。所有GPCRs家族(除了第4类真菌信息素受体家族)在盘基网柄菌中都有,其中第5家族最大,第2家族成员最少。我们首次在盘基网柄菌中鉴定出第1类视紫红质样GPCRs的存在。一些GPCRs在盘基网柄菌及其特定谱系中发生了扩增,并且通过表达模式的变化可能已被重新用于多细胞发育中的信号传导。讨论 我们的系统发育分析表明,GPCRs第1、2和6家族在变形虫纲早期就已经分化,而第3和5家族在盘基网柄菌中后来才扩展。在盘基网柄菌多细胞发育中具有实验支持作用的第6家族cAMP受体(;)起源于所有盘基网柄菌的根部,在 中只有弱相关的同源物。我们的分析确定了在盘基网柄菌中进化且可能已被用于多细胞发育的候选GPCRs。