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在白化病患者的血细胞 RNA 样本中可以检测到 OCA2 中的同义突变和错义突变的意想不到的后果。

Unsuspected consequences of synonymous and missense variants in OCA2 can be detected in blood cell RNA samples of patients with albinism.

机构信息

Rare Diseases Genetics and Metabolism, INSERM U1211, SBM Department, University of Bordeaux, Bordeaux, France.

Department of Medical Genetics, University Hospital of Bordeaux, Bordeaux, France.

出版信息

Pigment Cell Melanoma Res. 2024 Sep;37(5):534-545. doi: 10.1111/pcmr.13123. Epub 2023 Aug 31.

DOI:10.1111/pcmr.13123
PMID:37650133
Abstract

Oculocutaneous albinism type 2 (OCA2) is the second most frequent form of albinism and represents about 30% of OCA worldwide. As with all types of OCA, patients present with hypopigmentation of hair and skin, as well as severe visual abnormalities. We focused on a subgroup of 29 patients for whom genetic diagnosis was pending because at least one of their identified variants in or around exon 10 of OCA2 is of uncertain significance (VUS). By minigene assay, we investigated the effect of these VUS on exon 10 skipping and showed that not only intronic but also some synonymous variants can result in enhanced exon skipping. We further found that excessive skipping of exon 10 could be detected directly on blood samples of patients and of their one parent with the causal variant, avoiding invasive skin biopsies. Moreover, we show that variants, which result in lack of detectable OCA2 mRNA can be identified from blood samples as well, as shown for the most common OCA2 pathogenic missense variant c.1327G>A/p.(Val443Ile). In conclusion, blood cell RNA analysis allows testing the potential effect of any OCA2 VUS on transcription products. This should help to elucidate yet unsolved OCA2 patients and improve genetic counseling.

摘要

眼皮肤白化病 2 型(OCA2)是第二常见的白化病类型,约占全球 OCA 的 30%。与所有类型的 OCA 一样,患者表现为毛发和皮肤色素减退,以及严重的视觉异常。我们关注了一个亚组的 29 名患者,他们的基因诊断悬而未决,因为他们在 OCA2 的外显子 10 或其周围至少有一种已识别的变体具有不确定的意义(VUS)。通过微基因检测,我们研究了这些 VUS 对外显子 10 跳跃的影响,结果表明,不仅内含子,而且一些同义变体也可能导致外显子跳跃增强。我们进一步发现,通过直接对患者及其携带致病变体的一位父母的血液样本进行检测,可以检测到外显子 10 的过度跳跃,从而避免了侵入性的皮肤活检。此外,我们还表明,即使缺乏可检测到的 OCA2 mRNA,也可以从血液样本中识别出导致这种情况的变体,如最常见的 OCA2 致病错义变体 c.1327G>A/p.(Val443Ile)。总之,血细胞 RNA 分析可用于测试任何 OCA2 VUS 对转录产物的潜在影响。这有助于阐明尚未解决的 OCA2 患者的问题,并改善遗传咨询。

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Unsuspected consequences of synonymous and missense variants in OCA2 can be detected in blood cell RNA samples of patients with albinism.在白化病患者的血细胞 RNA 样本中可以检测到 OCA2 中的同义突变和错义突变的意想不到的后果。
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引用本文的文献

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Genotypic and phenotypic analysis of an oculocutaneous albinism patient: a case report and review of the literature.一名眼皮肤白化病患者的基因型和表型分析:病例报告及文献复习
J Med Case Rep. 2024 Dec 18;18(1):624. doi: 10.1186/s13256-024-04991-5.
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Functional Characterization of Splice Variants in the Diagnosis of Albinism.剪接变异在白化病诊断中的功能特征分析。
Int J Mol Sci. 2024 Aug 8;25(16):8657. doi: 10.3390/ijms25168657.