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金鱼基因组及其在理解基因调控和脊椎动物体形体态方面的应用。

The Goldfish Genome and Its Utility for Understanding Gene Regulation and Vertebrate Body Morphology.

机构信息

Laboratory of Functional Genomics, Graduate School of Bioscience, Nagahama Institute of Bioscience and Technology, Nagahama, Japan.

Translational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.

出版信息

Methods Mol Biol. 2024;2707:335-355. doi: 10.1007/978-1-0716-3401-1_22.

Abstract

Goldfish, widely viewed as an ornamental fish, is a member of Cyprinidae family and has a very long history in research for both genetics and physiology studies. Among Cyprinidae, the chromosomal locations of orthologs and the amino acid sequences are usually highly conserved. Adult goldfish are 1000 times larger than adult zebrafish (who are in the same family of fishes), which can make it easier to perform several types of experiments compared to their zebrafish cousins. Comparing mutant phenotypes in orthologous genes between goldfish and zebrafish can often be very informative and provide a deeper insight into the gene function than studying the gene in either species alone. Comparative genomics and phenotypic comparisons between goldfish and zebrafish will provide new opportunities for understanding the development and evolution of body forms in the vertebrate lineage.

摘要

金鱼,通常被视为观赏鱼类,是鲤科的一员,在遗传学和生理学研究方面有着非常悠久的历史。在鲤科鱼类中,同源基因的染色体位置和氨基酸序列通常高度保守。成年金鱼比成年斑马鱼(同科鱼类)大 1000 倍,这使得与它们的斑马鱼表亲相比,更容易进行多种类型的实验。比较金鱼和斑马鱼同源基因的突变表型通常非常有启发性,并能比单独研究这两个物种中的基因提供更深入的基因功能见解。金鱼和斑马鱼之间的比较基因组学和表型比较将为理解脊椎动物谱系中身体形态的发育和进化提供新的机会。

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