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链接北极海洋原生生物的极端季节性和基因表达。

Linking extreme seasonality and gene expression in Arctic marine protists.

机构信息

Department of Arctic Biology, The University Centre in Svalbard, Longyearbyen, Norway.

Department of Arctic and Marine Biology, UiT - The Arctic University of Norway, Tromsø, Norway.

出版信息

Sci Rep. 2023 Sep 5;13(1):14627. doi: 10.1038/s41598-023-41204-3.

DOI:10.1038/s41598-023-41204-3
PMID:37669980
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10480425/
Abstract

At high latitudes, strong seasonal differences in light availability affect marine organisms and regulate the timing of ecosystem processes. Marine protists are key players in Arctic aquatic ecosystems, yet little is known about their ecological roles over yearly cycles. This is especially true for the dark polar night period, which up until recently was assumed to be devoid of biological activity. A 12 million transcripts catalogue was built from 0.45 to 10 μm protist assemblages sampled over 13 months in a time series station in an Arctic fjord in Svalbard. Community gene expression was correlated with seasonality, with light as the main driving factor. Transcript diversity and evenness were higher during polar night compared to polar day. Light-dependent functions had higher relative expression during polar day, except phototransduction. 64% of the most expressed genes could not be functionally annotated, yet up to 78% were identified in Arctic samples from Tara Oceans, suggesting that Arctic marine assemblages are distinct from those from other oceans. Our study increases understanding of the links between extreme seasonality and biological processes in pico- and nanoplanktonic protists. Our results set the ground for future monitoring studies investigating the seasonal impact of climate change on the communities of microbial eukaryotes in the High Arctic.

摘要

在高纬度地区,光照的季节性差异强烈影响海洋生物,并调节生态系统过程的时间安排。海洋原生生物是北极水生生态系统的关键参与者,但人们对它们在年周期内的生态作用知之甚少。这在黑暗的极夜时期尤其如此,直到最近,人们还认为这个时期没有任何生物活动。从斯瓦尔巴群岛一个峡湾的时间序列站在 0.45 到 10 μm 的范围内采集的原生生物组合体中构建了一个包含 1200 万个转录本的目录。群落基因表达与季节性相关,光是主要驱动因素。与极昼相比,极夜时转录本多样性和均匀度更高。除了光转导之外,光依赖性功能在极昼时的相对表达更高。在最表达的基因中,有 64%无法进行功能注释,但高达 78%在 Tara Oceans 的北极样本中被鉴定出来,这表明北极海洋组合体与其他海洋的不同。我们的研究增加了对极端季节性和微微和纳米浮游原生生物生物过程之间联系的理解。我们的结果为未来的监测研究奠定了基础,这些研究将调查气候变化对高北极地区微生物真核生物群落的季节性影响。

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Arctic mid-winter phytoplankton growth revealed by autonomous profilers.自主剖面仪揭示北极冬季中期浮游植物的生长情况。
Sci Adv. 2020 Sep 25;6(39). doi: 10.1126/sciadv.abc2678. Print 2020 Sep.
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Microbial rhodopsins are major contributors to the solar energy captured in the sea.微生物视紫红质是海洋中捕获太阳能的主要贡献者。
Sci Adv. 2019 Aug 7;5(8):eaaw8855. doi: 10.1126/sciadv.aaw8855. eCollection 2019 Aug.
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A Series of Fortunate Events: Introducing Chlamydomonas as a Reference Organism.幸运事件系列:介绍衣藻作为参考生物。
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Marine DNA Viral Macro- and Microdiversity from Pole to Pole.从极地到极地的海洋 DNA 病毒宏多样性和微多样性。
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Time series are critical to understand microbial plankton diversity and ecology.时间序列对于理解微生物浮游生物的多样性和生态学至关重要。
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