Avram and Stella Goldstein-Goren Department of Biotechnology Engineering, Ben-Gurion University of the Negev, Beer Sheva 8410501, Israel.
Department of Civil and Environmental Engineering, Ben-Gurion University of the Negev, Beer Sheva 84105, Israel.
Sci Total Environ. 2023 Dec 15;904:166739. doi: 10.1016/j.scitotenv.2023.166739. Epub 2023 Sep 8.
The Negev petroglyphs are considered valuable cultural heritage sites, but unfortunately, they are exposed to deterioration processes caused by anthropogenic and natural forces. Despite the many studies that have already pointed to the role of cyanobacteria in biogenic rock weathering, the knowledge involved in the process is still lacking. In this study, a cyanobacterial strain was isolated from the Negev Desert petroglyphs aiming to reveal its involvement in geochemical cycles and in the weathering processes of the rock substrate. The strain was characterized using morphological, molecular, and microscopic studies. The morphological research revealed a green-bluish, bundle-forming filamentous strain characterized by trichomes embedded in a common sheath. A combination of Nanopore and Illumina sequencing technologies facilitated the assembly of a near-complete genome containing 5,458,034 base pairs. A total of 5027 coding sequences were revealed by implementing PROKKA software. Annotation of five replicas of the 16S ribosomal RNA genes revealed that the Negev cyanobacteria isolate is closely (99.73 %) related to Trichocoleus desertorum LSB90_MW403957 isolated from the Sahara Desert, Algeria. The local strain was thus named Trichocoleus desertorum NBK24 CP116619. Several gene sequences that code for possible environmental adaptation mechanisms were found. Our study also identified genes for membrane transporters involved in the exchange of chemical elements, suggesting a possible interaction with rock minerals. Microscopic observations of T. desertorum NBK24 CP116619 infected onto calcareous stone slabs under laboratory conditions demonstrated the effect of the isolated cyanobacteria on stone surface degradation. In conclusion, the findings of this study further our understanding of terrestrial cyanobacterial genomes and functions and highlight the role of T. desertorum NBK24 CP116619 in stone weathering processes. This information may contribute to the creation of efficient restoration strategies for stone monuments affected by cyanobacteria.
内盖夫的岩画被认为是具有重要文化价值的遗址,但不幸的是,它们受到人为和自然因素导致的劣化过程的影响。尽管已经有许多研究指出蓝细菌在生物成因岩石风化中的作用,但该过程所涉及的知识仍然缺乏。在这项研究中,从内盖夫沙漠岩画中分离出一种蓝细菌菌株,旨在揭示其在地球化学循环和岩石基质风化过程中的作用。该菌株通过形态学、分子学和显微镜研究进行了表征。形态学研究揭示了一种蓝绿色、束状的丝状菌株,其特征是嵌入共同鞘中的毛状体。纳米孔和 Illumina 测序技术的组合促进了近完整基因组的组装,该基因组包含 5458034 个碱基对。通过实施 PROKKA 软件,共揭示了 5027 个编码序列。对 5 个 16S 核糖体 RNA 基因的副本进行注释表明,内盖夫蓝细菌分离株与从阿尔及利亚撒哈拉沙漠分离的 Trichocoleus desertorum LSB90_MW403957 密切相关(99.73%)。因此,该分离株被命名为 Trichocoleus desertorum NBK24 CP116619。还发现了一些可能与环境适应机制相关的基因序列。我们的研究还鉴定了参与化学元素交换的膜转运体基因,表明与岩石矿物可能存在相互作用。在实验室条件下,观察到 Trichocoleus desertorum NBK24 CP116619 感染钙质石板后的微观现象,证明了分离出的蓝细菌对石头表面降解的影响。总之,这项研究的结果进一步了解了陆地蓝细菌的基因组和功能,并强调了 Trichocoleus desertorum NBK24 CP116619 在石质风化过程中的作用。这些信息可能有助于为受蓝细菌影响的石质纪念碑创造有效的修复策略。