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血液蛋白质组谱分析揭示脆性 X 前突变个体发生 FXTAS 风险的生物标志物和通路改变。

Blood Proteome Profiling Reveals Biomarkers and Pathway Alterations in Fragile X PM at Risk for Developing FXTAS.

机构信息

Department of Biochemistry and Molecular Medicine, School of Medicine, University of California Davis, Sacramento, CA 95817, USA.

Genome Center, Bioinformatics Core, University of California Davis, Davis, CA 95616, USA.

出版信息

Int J Mol Sci. 2023 Aug 30;24(17):13477. doi: 10.3390/ijms241713477.

Abstract

Fragile X-associated Tremor/Ataxia Syndrome (FXTAS) is a neurodegenerative disorder associated with the premutation. Currently, it is not possible to determine when and if individual premutation carriers will develop FXTAS. Thus, with the aim to identify biomarkers for early diagnosis, development, and progression of FXTAS, along with associated dysregulated pathways, we performed blood proteomic profiling of premutation carriers (PM) who, as part of an ongoing longitudinal study, emerged into two distinct groups: those who developed symptoms of FXTAS (converters, CON) over time (at subsequent visits) and those who did not (non-converters, NCON). We compared these groups to age-matched healthy controls (HC). We assessed CGG repeat allele size by Southern blot and PCR analysis. The proteomic profile was obtained by liquid chromatography mass spectrometry (LC-MS/MS). We identified several significantly differentiated proteins between HC and the PM groups at Visit 1 (V1), Visit 2 (V2), and between the visits. We further reported the dysregulated protein pathways, including sphingolipid and amino acid metabolism. Our findings are in agreement with previous studies showing that pathways involved in mitochondrial bioenergetics, as observed in other neurodegenerative disorders, are significantly altered and appear to contribute to the development of FXTAS. Lastly, we compared the blood proteome of the PM who developed FXTAS over time with the CSF proteome of the FXTAS patients recently reported and found eight significantly differentially expressed proteins in common. To our knowledge, this is the first report of longitudinal proteomic profiling and the identification of unique biomarkers and dysregulated protein pathways in FXTAS.

摘要

脆性 X 相关震颤共济失调综合征(FXTAS)是一种与前突变相关的神经退行性疾病。目前,无法确定个体前突变携带者何时以及是否会发展为 FXTAS。因此,为了确定 FXTAS 的早期诊断、发展和进展的生物标志物,以及相关的失调途径,我们对前突变携带者(PM)进行了血液蛋白质组学分析,这些 PM 作为正在进行的纵向研究的一部分,分为两组:随着时间的推移(在随后的就诊中)出现 FXTAS 症状的患者(转化者,CON)和未出现症状的患者(非转化者,NCON)。我们将这些组与年龄匹配的健康对照组(HC)进行了比较。我们通过 Southern blot 和 PCR 分析评估了 CGG 重复等位基因大小。蛋白质组学图谱通过液相色谱-质谱联用(LC-MS/MS)获得。我们在第 1 次就诊(V1)、第 2 次就诊(V2)和两次就诊之间发现了 HC 和 PM 组之间存在几种显著差异的蛋白质。我们进一步报告了失调的蛋白质途径,包括鞘脂和氨基酸代谢。我们的发现与先前的研究一致,表明涉及线粒体生物能的途径,如在其他神经退行性疾病中观察到的,发生了显著改变,似乎导致了 FXTAS 的发展。最后,我们比较了随着时间的推移出现 FXTAS 的 PM 的血液蛋白质组与最近报道的 FXTAS 患者的 CSF 蛋白质组,发现有 8 种蛋白质在两组中表达差异显著。据我们所知,这是首次对 FXTAS 进行纵向蛋白质组学分析以及鉴定独特的生物标志物和失调蛋白途径的报道。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6551/10488017/24edd1913d77/ijms-24-13477-g001.jpg

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