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一个由 ASAP1 基因座编码的非特征性长非编码 RNA 在 2 型糖尿病患者血清中下调。

An Uncharacterised lncRNA Coded by the ASAP1 Locus Is Downregulated in Serum of Type 2 Diabetes Mellitus Patients.

机构信息

Section of Biology and Genetics, Department of Biomedical and Biotechnological Sciences, University of Catania, 95123 Catania, Italy.

Department of Clinical and Experimental Medicine, Internal Medicine, Garibaldi-Nesima Hospital, University of Catania, 95122 Catania, Italy.

出版信息

Int J Mol Sci. 2023 Aug 30;24(17):13485. doi: 10.3390/ijms241713485.

Abstract

Diabetes mellitus (DM) is a complex and multifactorial disease characterised by high blood glucose. Type 2 Diabetes (T2D), the most frequent clinical condition accounting for about 90% of all DM cases worldwide, is a chronic disease with slow development usually affecting middle-aged or elderly individuals. T2D represents a significant problem of public health today because its incidence is constantly growing among both children and adults. It is also estimated that underdiagnosis prevalence would strongly further increase the real incidence of the disease, with about half of T2D patients being undiagnosed. Therefore, it is important to increase diagnosis accuracy. The current interest in RNA molecules (both protein- and non-protein-coding) as potential biomarkers for diagnosis, prognosis, and treatment lies in the ease and low cost of isolation and quantification with basic molecular biology techniques. In the present study, we analysed the transcriptome in serum samples collected from T2D patients and unaffected individuals to identify potential RNA-based biomarkers. Microarray-based profiling and subsequent validation using Real-Time PCR identified an uncharacterised long non-coding RNA (lncRNA) transcribed from the ASAP1 locus as a potential diagnostic biomarker. ROC curve analysis showed that a molecular signature including the lncRNA and the clinicopathological parameters of T2D patients as well as unaffected individuals showed a better diagnostic performance compared with the glycated haemoglobin test (HbA1c). This result suggests that the application of this biomarker in clinical practice would help to improve the diagnosis, and therefore the clinical management, of T2D patients. The proposed biomarker would be useful in the context of predictive, preventive, and personalised medicine (3PM/PPPM).

摘要

糖尿病(DM)是一种复杂的多因素疾病,其特征是血糖升高。2 型糖尿病(T2D)是最常见的临床病症,占全球所有 DM 病例的约 90%,是一种慢性疾病,发展缓慢,通常影响中老年人。T2D 是当今公共卫生的一个重大问题,因为其在儿童和成人中的发病率不断上升。据估计,漏诊率高将大大增加该疾病的实际发病率,约有一半的 T2D 患者未被诊断。因此,提高诊断准确性很重要。目前人们对 RNA 分子(包括蛋白编码和非蛋白编码)作为潜在诊断、预后和治疗标志物的兴趣在于其易于用基本分子生物学技术分离和定量,且成本低廉。在本研究中,我们分析了来自 T2D 患者和未受影响个体的血清样本中的转录组,以确定潜在的基于 RNA 的生物标志物。基于微阵列的分析和随后使用 Real-Time PCR 的验证确定了 ASAP1 基因座转录的一种未表征的长非编码 RNA(lncRNA)作为潜在的诊断生物标志物。ROC 曲线分析显示,包含 lncRNA 和 T2D 患者以及未受影响个体的临床病理参数的分子特征与糖化血红蛋白测试(HbA1c)相比具有更好的诊断性能。这一结果表明,该生物标志物在临床实践中的应用将有助于改善 T2D 患者的诊断,从而改善其临床管理。该提出的生物标志物在预测性、预防性和个体化医学(3PM/PPPM)中将会很有用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8f86/10488254/72f07c38019d/ijms-24-13485-g001.jpg

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