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用于4R Tau异构体选择性模板聚集的精确蛋白异构体设计

Precision Proteoform Design for 4R Tau Isoform Selective Templated Aggregation.

作者信息

Longhini Andrew P, DuBose Austin, Lobo Samuel, Vijayan Vishnu, Bai Yeran, Rivera Erica Keane, Sala-Jarque Julia, Nikitina Arina, Carrettiero Daniel C, Unger Matthew, Sclafani Olivia, Fu Valerie, Vigers Michael, Buee Luc, Landrieu Isabelle, Shell Scott, Shea Joan E, Han Songi, Kosik Kenneth S

机构信息

Neuroscience Research Institute, University of California Santa Barbara, Santa Barbara, California, USA.

Molecular, Cell and Developmental Biology, University of California Santa Barbara, Santa Barbara, California, USA.

出版信息

bioRxiv. 2023 Nov 28:2023.08.31.555649. doi: 10.1101/2023.08.31.555649.

DOI:10.1101/2023.08.31.555649
PMID:37693456
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10491155/
Abstract

Prion-like spread of disease-specific tau conformers is a hallmark of all tauopathies. A 19-residue probe peptide containing a P301L mutation and spanning the R2/R3 splice junction of tau, folds and stacks into seeding-competent fibrils and induces aggregation of 4R, but not 3R tau. These tau peptide fibrils propagate aggregated intracellular tau over multiple generations, have a high β-sheet content, a colocalized lipid signal, and adopt a well-defined U-shaped fold found in 4R tauopathy brain-derived fibrils. Fully atomistic replica exchange molecular dynamics (MD) simulations were used to compute the free energy landscapes of the conformational ensemble of the peptide monomers. These identified an aggregation-prohibiting β-hairpin structure and an aggregation-competent U-fold unique to 4R tauopathy fibrils. Guided by MD simulations, we identified that the N-terminal-flanking residues to PHF6, which slightly vary between 4R and 3R isoforms, modulate seeding. Strikingly, when a single amino acid switch at position 305 replaced the serine of 4R tau with a lysine from the corresponding position in the first repeat of 3R tau, the seeding induced by the 19-residue peptide was markedly reduced. Conversely, a 4R tau mimic with three repeats, prepared by replacing those amino acids in the first repeat with those amino acids uniquely present in the second repeat, recovered aggregation when exposed to the 19-residue peptide. These peptide fibrils function as partial prions to recruit naïve 4R tau-ten times the length of the peptide-and serve as a critical template for 4R tauopathy propagation. These results hint at opportunities for tau isoform-specific therapeutic interventions.

摘要

疾病特异性tau构象异构体的朊病毒样传播是所有tau蛋白病的一个标志。一种含有P301L突变、跨越tau蛋白R2/R3剪接位点的19个残基的探针肽,折叠并堆积成具有种子形成能力的原纤维,并诱导4R tau蛋白聚集,但不诱导3R tau蛋白聚集。这些tau肽原纤维在多代细胞中传播聚集的细胞内tau蛋白,具有高β-折叠含量、共定位的脂质信号,并呈现出在4R tau蛋白病脑源性原纤维中发现的明确的U形折叠。使用全原子复制交换分子动力学(MD)模拟来计算肽单体构象集合的自由能景观。这些模拟确定了一种聚集抑制性β-发夹结构和一种4R tau蛋白病原纤维特有的具有聚集能力的U形折叠。在MD模拟的指导下,我们发现PHF6侧翼的N端残基在4R和3R异构体之间略有不同,它们调节种子形成。令人惊讶的是,当305位的单个氨基酸切换将4R tau蛋白的丝氨酸替换为3R tau蛋白第一个重复序列中相应位置的赖氨酸时,由19个残基肽诱导的种子形成明显减少。相反,通过将第一个重复序列中的氨基酸替换为第二个重复序列中独特存在的氨基酸而制备的具有三个重复序列的4R tau模拟物,在暴露于19个残基肽时恢复了聚集。这些肽原纤维作为部分朊病毒发挥作用,招募长度为肽十倍的未成熟4R tau蛋白,并作为4R tau蛋白病传播的关键模板。这些结果暗示了tau异构体特异性治疗干预的机会。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/bd259a5fa08d/nihpp-2023.08.31.555649v3-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/f4b09225dc49/nihpp-2023.08.31.555649v3-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/49121e932c1b/nihpp-2023.08.31.555649v3-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/d73cfad52508/nihpp-2023.08.31.555649v3-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/3a3f39b2d693/nihpp-2023.08.31.555649v3-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/e467918b5472/nihpp-2023.08.31.555649v3-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/ad9f7ec0f630/nihpp-2023.08.31.555649v3-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/bd259a5fa08d/nihpp-2023.08.31.555649v3-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/f4b09225dc49/nihpp-2023.08.31.555649v3-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/49121e932c1b/nihpp-2023.08.31.555649v3-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/d73cfad52508/nihpp-2023.08.31.555649v3-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/3a3f39b2d693/nihpp-2023.08.31.555649v3-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/e467918b5472/nihpp-2023.08.31.555649v3-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/ad9f7ec0f630/nihpp-2023.08.31.555649v3-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef94/10695241/bd259a5fa08d/nihpp-2023.08.31.555649v3-f0007.jpg

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本文引用的文献

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Disease-specific tau filaments assemble via polymorphic intermediates.特定疾病的 tau 纤维通过多态中间产物组装。
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A Hairpin Motif in the Amyloid-β Peptide Is Important for Formation of Disease-Related Oligomers.发夹基序在淀粉样β肽中对于形成与疾病相关的寡聚体很重要。
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超分辨率成像揭示了 tau 聚集物在接种后的自我复制。
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Mutations in α-synuclein, TDP-43 and tau prolong protein half-life through diminished degradation by lysosomal proteases.α-突触核蛋白、TDP-43 和 tau 的突变通过减少溶酶体蛋白酶的降解来延长蛋白质半衰期。
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Fluorescently Guided Optical Photothermal Infrared Microspectroscopy for Protein-Specific Bioimaging at Subcellular Level.荧光引导光热红外显微光谱法在亚细胞水平的蛋白质特异性生物成像。
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