Tu Sheng, Qiu Yunqing
State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, China.
Front Pharmacol. 2023 Aug 24;14:1213506. doi: 10.3389/fphar.2023.1213506. eCollection 2023.
Transcription factors in Foxo signaling pathway influence hepatocellular carcinoma metastasis through epithelial mesenchymal transition-related pathways. Prognostic factors in the Foxo signaling pathway are feasible for HCC prognosis and therapeutic management. Based on the differentially expressed genes and Foxo signaling pathway genes in HCC, the ConsensusClusterPlus package was conducted to identify Foxo signaling pathway-related molecular subtypes in HCC. Based on the DEGs in the FMSs, the optimal prognostic factors in HCC were screened by cox and least absolute shrinkage and selection operator (LASSO) cox analysis to form the Foxo prognosis score (FPS). The prognostic predictive effectiveness of FPS was assessed by Kaplan Meier (K-M) analysis and Receiver Operating Characteristic (ROC) analysis. Additionally, tumor microenvironment (TME) score, tumor mutation burden (TMB) and treatment sensitivity differences in FMSs and FPS groups were also evaluated. There were low, medium and high Foxo signaling pathway activity molecular subtypes in HCC named FMS 1, FMS 2 and FMS 3, respectively. FMS 1 with lowest Foxo signaling pathway activity presented an excellent survival advantage, while FMS 3 with highest Foxo signaling pathway activity exhibited an inhibitory TME status. According to FPS grouping, low FPS exhibited favorable survival, low TMB and anti-tumor activity. Patients in the low FPS group were mostly in the early stage of cancer. Moreover, we found that patients with high and low FPS exhibited different sensitivity to chemotherapy, and patients with low FPS were more sensitive to immunotherapy. We revealed a novel molecular subtype and prognostic tool based on Foxo signaling pathway signature, which could potentially provide a direction for accurate and effective assessment of potential personalized treatment options and prognostic management for HCC patients.
Foxo信号通路中的转录因子通过上皮-间质转化相关途径影响肝细胞癌转移。Foxo信号通路中的预后因素对肝癌的预后和治疗管理具有可行性。基于肝癌中差异表达基因和Foxo信号通路基因,使用ConsensusClusterPlus软件包识别肝癌中与Foxo信号通路相关的分子亚型。基于FMSs中的差异表达基因,通过cox和最小绝对收缩和选择算子(LASSO)cox分析筛选肝癌的最佳预后因素,以形成Foxo预后评分(FPS)。通过Kaplan Meier(K-M)分析和受试者工作特征(ROC)分析评估FPS的预后预测有效性。此外,还评估了FMSs和FPS组的肿瘤微环境(TME)评分、肿瘤突变负荷(TMB)和治疗敏感性差异。肝癌中存在低、中、高Foxo信号通路活性分子亚型,分别命名为FMS 1、FMS 2和FMS 3。Foxo信号通路活性最低的FMS 1具有良好的生存优势,而Foxo信号通路活性最高的FMS 3表现出抑制性的TME状态。根据FPS分组,低FPS显示出良好的生存率、低TMB和抗肿瘤活性。低FPS组的患者大多处于癌症早期。此外,我们发现高FPS和低FPS的患者对化疗表现出不同的敏感性,低FPS的患者对免疫治疗更敏感。我们揭示了一种基于Foxo信号通路特征的新型分子亚型和预后工具,这可能为准确有效地评估肝癌患者潜在的个性化治疗方案和预后管理提供方向。