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一种含古菌帽的阿魏酸酯酶可降解聚对苯二甲酸乙二酯。

An archaeal lid-containing feruloyl esterase degrades polyethylene terephthalate.

作者信息

Perez-Garcia Pablo, Chow Jennifer, Costanzi Elisa, Gurschke Marno, Dittrich Jonas, Dierkes Robert F, Molitor Rebecka, Applegate Violetta, Feuerriegel Golo, Tete Prince, Danso Dominik, Thies Stephan, Schumacher Julia, Pfleger Christopher, Jaeger Karl-Erich, Gohlke Holger, Smits Sander H J, Schmitz Ruth A, Streit Wolfgang R

机构信息

Department of Microbiology and Biotechnology, University of Hamburg, Hamburg, Germany.

Institute for General Microbiology, Christian-Albrechts-Universität zu Kiel, Kiel, Germany.

出版信息

Commun Chem. 2023 Sep 11;6(1):193. doi: 10.1038/s42004-023-00998-z.

DOI:10.1038/s42004-023-00998-z
PMID:37697032
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10495362/
Abstract

Polyethylene terephthalate (PET) is a commodity polymer known to globally contaminate marine and terrestrial environments. Today, around 80 bacterial and fungal PET-active enzymes (PETases) are known, originating from four bacterial and two fungal phyla. In contrast, no archaeal enzyme had been identified to degrade PET. Here we report on the structural and biochemical characterization of PET46 (RLI42440.1), an archaeal promiscuous feruloyl esterase exhibiting degradation activity on semi-crystalline PET powder comparable to IsPETase and LCC (wildtypes), and higher activity on bis-, and mono-(2-hydroxyethyl) terephthalate (BHET and MHET). The enzyme, found by a sequence-based metagenome search, is derived from a non-cultivated, deep-sea Candidatus Bathyarchaeota archaeon. Biochemical characterization demonstrated that PET46 is a promiscuous, heat-adapted hydrolase. Its crystal structure was solved at a resolution of 1.71 Å. It shares the core alpha/beta-hydrolase fold with bacterial PETases, but contains a unique lid common in feruloyl esterases, which is involved in substrate binding. Thus, our study widens the currently known diversity of PET-hydrolyzing enzymes, by demonstrating PET depolymerization by a plant cell wall-degrading esterase.

摘要

聚对苯二甲酸乙二酯(PET)是一种常见聚合物,已知其在全球范围内污染海洋和陆地环境。目前,已知约80种细菌和真菌来源的PET活性酶(PET酶),它们源自四个细菌门和两个真菌门。相比之下,尚未鉴定出古菌来源的可降解PET的酶。在此,我们报告了PET46(RLI42440.1)的结构和生化特性,这是一种古菌来源的混杂阿魏酸酯酶,其对半结晶PET粉末的降解活性与IsPETase和LCC(野生型)相当,对双(2-羟乙基)对苯二甲酸酯(BHET)和单(2-羟乙基)对苯二甲酸酯(MHET)的活性更高。该酶通过基于序列的宏基因组搜索发现,源自未培养的深海“候选深古菌属”古菌。生化特性表明,PET46是一种混杂的、热适应的水解酶。其晶体结构以1.71Å的分辨率解析。它与细菌PET酶共享核心α/β水解酶折叠,但含有阿魏酸酯酶中常见的独特盖子结构域,该结构域参与底物结合。因此,我们的研究通过证明一种植物细胞壁降解酯酶可使PET解聚,拓宽了目前已知的PET水解酶的多样性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/48f4bfe826f9/42004_2023_998_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/ad2cef62a42d/42004_2023_998_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/3de2275f99c8/42004_2023_998_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/9aac28a4769f/42004_2023_998_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/479ff0165112/42004_2023_998_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/a5cb2d92bfe9/42004_2023_998_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/48f4bfe826f9/42004_2023_998_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/ad2cef62a42d/42004_2023_998_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/3de2275f99c8/42004_2023_998_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/9aac28a4769f/42004_2023_998_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/479ff0165112/42004_2023_998_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/a5cb2d92bfe9/42004_2023_998_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5663/10495362/48f4bfe826f9/42004_2023_998_Fig6_HTML.jpg

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