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来自火山岛伊斯基亚热液喷口的嗜热羧酸酯酶对合成和生物基聚合物及真菌毒素有活性。

Thermophilic Carboxylesterases from Hydrothermal Vents of the Volcanic Island of Ischia Active on Synthetic and Biobased Polymers and Mycotoxins.

机构信息

Centre for Environmental Biotechnology, School of Natural Sciences, Bangor University, Bangor, United Kingdom.

Department of Applied Biocatalysis, ICP, CSIC, Madrid, Spain.

出版信息

Appl Environ Microbiol. 2023 Feb 28;89(2):e0170422. doi: 10.1128/aem.01704-22. Epub 2023 Jan 31.

Abstract

Hydrothermal vents are geographically widespread and host microorganisms with robust enzymes useful in various industrial applications. We examined microbial communities and carboxylesterases of two terrestrial hydrothermal vents of the volcanic island of Ischia (Italy) predominantly composed of , , and . High-temperature enrichment cultures with the polyester plastics polyhydroxybutyrate and polylactic acid (PLA) resulted in an increase of and species and to some extent and species. The screening at 37 to 70°C of metagenomic fosmid libraries from above enrichment cultures identified three hydrolases (IS10, IS11, and IS12), all derived from yet-uncultured and showing low sequence identity (33 to 56%) to characterized enzymes. Enzymes expressed in Escherichia coli exhibited maximal esterase activity at 70 to 90°C, with IS11 showing the highest thermostability (90% activity after 20-min incubation at 80°C). IS10 and IS12 were highly substrate promiscuous and hydrolyzed all 51 monoester substrates tested. Enzymes were active with PLA, polyethylene terephthalate model substrate, and mycotoxin T-2 (IS12). IS10 and IS12 had a classical α/β-hydrolase core domain with a serine hydrolase catalytic triad (Ser155, His280, and Asp250) in their hydrophobic active sites. The crystal structure of IS11 resolved at 2.92 Å revealed the presence of a N-terminal β-lactamase-like domain and C-terminal lipocalin domain. The catalytic cleft of IS11 included catalytic Ser68, Lys71, Tyr160, and Asn162, whereas the lipocalin domain enclosed the catalytic cleft like a lid and contributed to substrate binding. Our study identified novel thermotolerant carboxylesterases with a broad substrate range, including polyesters and mycotoxins, for potential applications in biotechnology. High-temperature-active microbial enzymes are important biocatalysts for many industrial applications, including recycling of synthetic and biobased polyesters increasingly used in textiles, fibers, coatings and adhesives. Here, we identified three novel thermotolerant carboxylesterases (IS10, IS11, and IS12) from high-temperature enrichment cultures from Ischia hydrothermal vents and incubated with biobased polymers. The identified metagenomic enzymes originated from uncultured and showed low sequence similarity to known carboxylesterases. Active sites of IS10 and IS12 had the largest effective volumes among the characterized prokaryotic carboxylesterases and exhibited high substrate promiscuity, including hydrolysis of polyesters and mycotoxin T-2 (IS12). Though less promiscuous than IS10 and IS12, IS11 had a higher thermostability with a high temperature optimum (80 to 90°C) for activity and hydrolyzed polyesters, and its crystal structure revealed an unusual lipocalin domain likely involved in substrate binding. The polyesterase activity of these enzymes makes them attractive candidates for further optimization and potential application in plastics recycling.

摘要

热液喷口在地理上分布广泛,其微生物拥有各种工业应用中有用的强健酶。我们研究了意大利伊斯基亚火山岛的两个陆地热液喷口的微生物群落和羧酸酯酶,这些喷口主要由、和组成。用聚酯塑料聚羟基丁酸酯(PHB)和聚乳酸(PLA)进行高温富集培养,导致和物种增加,在某种程度上也导致和物种增加。从上述富集培养物的宏基因组噬菌粒文库中在 37 至 70°C 进行筛选,鉴定出三种水解酶(IS10、IS11 和 IS12),均来自尚未培养的,与已鉴定的酶相比,其序列同一性(33%至 56%)较低。在大肠杆菌中表达的酶在 70 至 90°C 时表现出最高的酯酶活性,其中 IS11 表现出最高的热稳定性(80°C 孵育 20 分钟后仍有 90%的活性)。IS10 和 IS12 对底物具有高度的混杂性,可水解所有 51 种单酯底物。这些酶对 PLA、聚对苯二甲酸乙二醇酯模型底物和霉菌毒素 T-2(IS12)均具有活性。IS10 和 IS12 具有经典的 α/β-水解酶核心结构域,其疏水性活性位点中含有丝氨酸水解酶催化三联体(Ser155、His280 和 Asp250)。IS11 的 2.92Å分辨率晶体结构揭示了存在 N 端β-内酰胺酶样结构域和 C 端脂联蛋白结构域。IS11 的催化裂缝包括催化 Ser68、Lys71、Tyr160 和 Asn162,而脂联蛋白结构域则像盖子一样封闭催化裂缝,并有助于底物结合。我们的研究从伊斯基亚热液喷口的高温富集培养物中鉴定出了三种新型耐热羧酸酯酶,它们具有广泛的底物范围,包括聚酯和霉菌毒素,可潜在应用于生物技术领域。高温活性微生物酶是许多工业应用(包括越来越多地用于纺织品、纤维、涂料和粘合剂的合成和生物基聚酯的回收利用)的重要生物催化剂。在这里,我们从伊斯基亚热液喷口的高温富集培养物中鉴定出了三种新型耐热羧酸酯酶(IS10、IS11 和 IS12),并用生物基聚合物对其进行了孵育。鉴定出的宏基因组酶来自未培养的,与已知的羧酸酯酶的序列相似性较低。IS10 和 IS12 的活性位点在已鉴定的原核羧酸酯酶中具有最大的有效体积,并表现出高底物混杂性,包括聚酯和霉菌毒素 T-2(IS12)的水解。尽管不如 IS10 和 IS12 混杂,但 IS11 的热稳定性更高,最适温度为 80 至 90°C,具有活性和水解聚酯的能力,其晶体结构揭示了一个不寻常的脂联蛋白结构域,可能参与底物结合。这些酶的聚酯酶活性使它们成为进一步优化和潜在应用于塑料回收的有吸引力的候选物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/36d0/9972953/803c85290d18/aem.01704-22-f001.jpg

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