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淡水连通性改变了生物多样性的空间综合信号。

Freshwater connectivity transforms spatially integrated signals of biodiversity.

机构信息

Department of Biology, McGill University, 1205 Docteur Penfield, Stewart Biology Building, Montreal, Quebec, Canada.

School of Biological and Behavioural Sciences, Queen Mary University of London, Fogg Building, Mile End Road, London, UK.

出版信息

Proc Biol Sci. 2023 Sep 13;290(2006):20230841. doi: 10.1098/rspb.2023.0841.

DOI:10.1098/rspb.2023.0841
PMID:37700653
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10498028/
Abstract

Aquatic ecosystems offer a continuum of water flow from headwater streams to inland lakes and coastal marine systems. This spatial connectivity influences the structure, function and dynamics of aquatic communities, which are among the most threatened and degraded on the Earth. Here, we determine the spatial resolution of environmental DNA (eDNA) in dendritic freshwater networks, which we use as a model for connected metacommunities. Our intensive sampling campaign comprised over 420 eDNA samples across 21 connected lakes, allowing us to analyse detections at a variety of scales, from different habitats within a lake to entire lake networks. We found strong signals of within-lake variation in eDNA distribution reflective of typical habitat use by both fish and zooplankton. Most importantly, we also found that connecting channels between lakes resulted in an accumulation of downstream eDNA detections in lakes with a higher number of inflows, and as networks increased in length. Environmental DNA achieves biodiversity surveys in these habitats in a high-throughput, spatially integrated way. These findings have profound implications for the interpretation of eDNA detections in aquatic ecosystems in global-scale biodiversity monitoring observations.

摘要

水生生态系统提供了从源头溪流到内陆湖泊和沿海水域系统的连续水流。这种空间连通性影响着水生群落的结构、功能和动态,而水生群落是地球上受威胁和退化最严重的群落之一。在这里,我们确定了树枝状淡水网络中环境 DNA (eDNA) 的空间分辨率,我们将其作为连接的复合群落的模型。我们的密集采样活动包括在 21 个相连的湖泊中采集了超过 420 个 eDNA 样本,使我们能够在多种尺度上分析检测结果,从一个湖泊内的不同栖息地到整个湖泊网络。我们发现,eDNA 分布的湖泊内变化具有很强的信号,反映了鱼类和浮游动物的典型栖息地利用情况。最重要的是,我们还发现,湖泊之间的连接通道导致流入湖泊的下游 eDNA 检测积累,而随着网络长度的增加,这种情况也会增加。环境 DNA 以高通量、空间综合的方式在这些生境中进行生物多样性调查。这些发现对在全球生物多样性监测观测中解释水生生态系统中的 eDNA 检测结果具有深远的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2459/10498028/c66fc27fd481/rspb20230841f05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2459/10498028/515a73221b88/rspb20230841f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2459/10498028/6b7170dea4c2/rspb20230841f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2459/10498028/154ffd9b6a79/rspb20230841f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2459/10498028/af1c71ddb1a5/rspb20230841f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2459/10498028/c66fc27fd481/rspb20230841f05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2459/10498028/515a73221b88/rspb20230841f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2459/10498028/6b7170dea4c2/rspb20230841f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2459/10498028/154ffd9b6a79/rspb20230841f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2459/10498028/af1c71ddb1a5/rspb20230841f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2459/10498028/c66fc27fd481/rspb20230841f05.jpg

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本文引用的文献

1
The application of metacommunity theory to the management of riverine ecosystems.元群落理论在河流生态系统管理中的应用。
WIREs Water. 2021 Aug 16;8(6):1-21. doi: 10.1002/wat2.1557.
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Thermal stratification and fish thermal preference explain vertical eDNA distributions in lakes.热分层和鱼类的热偏好解释了湖泊中垂直分布的环境 DNA。
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Assessment of fish communities using environmental DNA: Effect of spatial sampling design in lentic systems of different sizes.
利用环境 DNA 评估鱼类群落:不同大小的静水系统中空间采样设计的影响。
Mol Ecol Resour. 2020 Jan;20(1):242-255. doi: 10.1111/1755-0998.13105. Epub 2019 Nov 15.
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Estimating species distribution and abundance in river networks using environmental DNA.利用环境 DNA 估算河流网络中的物种分布和丰度。
Proc Natl Acad Sci U S A. 2018 Nov 13;115(46):11724-11729. doi: 10.1073/pnas.1813843115. Epub 2018 Oct 29.
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Environmental DNA reveals quantitative patterns of fish biodiversity in large rivers despite its downstream transportation.环境 DNA 揭示了大型河流中鱼类生物多样性的定量模式,尽管其下游运输。
Sci Rep. 2018 Jul 10;8(1):10361. doi: 10.1038/s41598-018-28424-8.
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Environmental DNA (eDNA) Shedding and Decay Rates to Model Freshwater Mussel eDNA Transport in a River.环境 DNA(eDNA)脱落和衰减率可用于模拟河流中淡水贻贝类 eDNA 的运输。
Environ Sci Technol. 2017 Dec 19;51(24):14244-14253. doi: 10.1021/acs.est.7b05199. Epub 2017 Nov 29.
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Exact sequence variants should replace operational taxonomic units in marker-gene data analysis.在标记基因数据分析中,精确序列变体应取代操作分类单元。
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Rapid degradation of longer DNA fragments enables the improved estimation of distribution and biomass using environmental DNA.较长 DNA 片段的快速降解使得利用环境 DNA 能够更好地估计分布和生物量。
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