Department of Biomedical Engineering and Center for Biomolecular Condensates, James F. McKelvey School of Engineering, Washington University in St. Louis, St. Louis, Missouri.
Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.
Biophys J. 2024 Jun 4;123(11):1376-1392. doi: 10.1016/j.bpj.2023.09.006. Epub 2023 Sep 16.
Macromolecular solubility is an important contributor to the driving forces for phase separation. Formally, the driving forces in a binary mixture comprising a macromolecule dissolved in a solvent can be quantified in terms of the saturation concentration, which is the threshold macromolecular concentration above which the mixture separates into coexisting dense and dilute phases. In addition, the second virial coefficient, which measures the effective strength of solvent-mediated intermolecular interactions provides direct assessments of solvent quality. The sign and magnitude of second virial coefficients will be governed by a combination of solution conditions and the nature of the macromolecule of interest. Here, we show, using a combination of theory, simulation, and in vitro experiments, that titrations of crowders, providing they are true depletants, can be used to extract the intrinsic driving forces for macromolecular phase separation. This refers to saturation concentrations in the absence of crowders and the second virial coefficients that quantify the magnitude of the incompatibility between macromolecules and the solvent. Our results show how the depletion-mediated attractions afforded by crowders can be leveraged to obtain comparative assessments of macromolecule-specific, intrinsic driving forces for phase separation.
大分子溶解度是相分离驱动力的重要贡献者。从形式上讲,由溶解在溶剂中的大分子组成的二元混合物的驱动力可以用饱和浓度来定量,饱和浓度是混合物分离为共存的致密相和稀相的大分子浓度阈值。此外,第二维里系数测量溶剂介导的分子间相互作用的有效强度,为溶剂质量提供了直接评估。第二维里系数的符号和大小将由溶液条件和感兴趣的大分子的性质共同决定。在这里,我们使用理论、模拟和体外实验相结合的方法表明,只要加合物是真正的耗尽剂,就可以通过滴定加合物来提取大分子相分离的固有驱动力。这是指在不存在加合物的情况下的饱和浓度和量化大分子与溶剂之间不兼容性的第二维里系数。我们的结果表明,如何利用加合物介导的耗尽吸引力来获得相分离的大分子特异性固有驱动力的比较评估。