Wang Huaming, Lin Xi, Wang Xinda, Liu Xinxiu, He Shaozheng, Lyu Guorong
Department of Ultrasound, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, Fujian, China.
Department of Diagnostic Radiology, Fujian Cancer Hospital of Fujian Medical University, Fuzhou, Fujian, China.
Front Genet. 2023 Sep 6;14:1254829. doi: 10.3389/fgene.2023.1254829. eCollection 2023.
Maternal body fluids contain abundant cell-free fetal RNAs which have the potential to serve as indicators of fetal development and pathophysiological conditions. In this context, this study aimed to explore the potential diagnostic value of maternal circulating long non-coding RNAs (lncRNAs) in ventricular septal defect (VSD). The potential of lncRNAs as non-invasive prenatal biomarkers for VSD was evaluated using quantitative polymerase chain reaction (qPCR) and receiver operating characteristic (ROC) curve analysis. The biological processes and regulatory network of these lncRNAs were elucidated through bioinformatics analysis. Three lncRNAs (LINC00598, LINC01551, and GATA3-AS1) were found to be consistent in both maternal plasma and amniotic fluid. These lncRNAs exhibited strong diagnostic performance for VSD, with AUC values of 0.852, 0.957, and 0.864, respectively. The bioinformatics analysis revealed the involvement of these lncRNAs in heart morphogenesis, actin cytoskeleton organization, cell cycle regulation, and protein binding through a competitive endogenous RNA (ceRNA) network at the post-transcriptional level. The cell-free lncRNAs present in the amniotic fluid have the potential to be released into the maternal circulation, making them promising candidates for investigating epigenetic regulation in VSD.
母体体液中含有丰富的无细胞胎儿RNA,这些RNA有潜力作为胎儿发育和病理生理状况的指标。在此背景下,本研究旨在探讨母体循环长链非编码RNA(lncRNA)在室间隔缺损(VSD)中的潜在诊断价值。使用定量聚合酶链反应(qPCR)和受试者工作特征(ROC)曲线分析评估lncRNA作为VSD非侵入性产前生物标志物的潜力。通过生物信息学分析阐明这些lncRNA的生物学过程和调控网络。发现三种lncRNA(LINC00598、LINC01551和GATA3-AS1)在母体血浆和羊水中均一致。这些lncRNA对VSD表现出强大的诊断性能,AUC值分别为0.852、0.957和0.864。生物信息学分析表明,这些lncRNA在转录后水平通过竞争性内源RNA(ceRNA)网络参与心脏形态发生、肌动蛋白细胞骨架组织、细胞周期调控和蛋白质结合。羊水中存在的无细胞lncRNA有可能释放到母体循环中,使其成为研究VSD表观遗传调控的有前景的候选物。