Samantaray Tanmayee, Gupta Utsav, Saini Jitender, Gupta Cota Navin
Neural Engineering Lab, Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati 781039, India.
Department of Neuroimaging and Interventional Radiology, National Institute of Mental Health and Neurosciences, Bengaluru 560029, India.
Brain Sci. 2023 Sep 8;13(9):1297. doi: 10.3390/brainsci13091297.
We propose a novel algorithm called Unique Brain Network Identification Number (UBNIN) for encoding the brain networks of individual subjects. To realize this objective, we employed structural MRI on 180 Parkinson's disease (PD) patients and 70 healthy controls (HC) from the National Institute of Mental Health and Neurosciences, India. We parcellated each subject's brain volume and constructed an individual adjacency matrix using the correlation between the gray matter volumes of every pair of regions. The unique code is derived from values representing connections for every node (i), weighted by a factor of 2. The numerical representation (UBNIN) was observed to be distinct for each individual brain network, which may also be applied to other neuroimaging modalities. UBNIN ranges observed for PD were 15,360 to 17,768,936,615,460,608, and HC ranges were 12,288 to 17,733,751,438,064,640. This model may be implemented as a neural signature of a person's unique brain connectivity, thereby making it useful for brainprinting applications. Additionally, we segregated the above datasets into five age cohorts: A: ≤32 years (1 = 4, 2 = 5), B: 33-42 years (1 = 18, 2 = 14), C: 43-52 years (1 = 42, 2 = 23), D: 53-62 years (1 = 69, 2 = 22), and E: ≥63 years (1 = 46, 2 = 6), where 1 and 2 are the number of individuals in PD and HC, respectively, to study the variation in network topology over age. Sparsity was adopted as the threshold estimate to binarize each age-based correlation matrix. Connectivity metrics were obtained using Brain Connectivity toolbox (Version 2019-03-03)-based MATLAB (R2020a) functions. For each age cohort, a decreasing trend was observed in the mean clustering coefficient with increasing sparsity. Significantly different clustering coefficients were noted in PD between age-cohort B and C (sparsity: 0.63, 0.66), C and E (sparsity: 0.66, 0.69), and in HC between E and B (sparsity: 0.75 and above 0.81), E and C (sparsity above 0.78), E and D (sparsity above 0.84), and C and D (sparsity: 0.9). Our findings suggest network connectivity patterns change with age, indicating network disruption may be due to the underlying neuropathology. Varying clustering coefficients for different cohorts indicate that information transfer between neighboring nodes changes with age. This provides evidence of age-related brain shrinkage and network degeneration. We also discuss limitations and provide an open-access link to software codes and a help file for the entire study.
我们提出了一种名为独特脑网络识别码(UBNIN)的新型算法,用于对个体受试者的脑网络进行编码。为实现这一目标,我们对来自印度国家心理健康和神经科学研究所的180名帕金森病(PD)患者和70名健康对照(HC)进行了结构磁共振成像(MRI)检查。我们将每个受试者的脑容积进行了脑区划分,并利用每对脑区灰质体积之间的相关性构建了个体邻接矩阵。独特编码源自表示每个节点(i)连接的数值,并乘以2的因子进行加权。观察发现,每个个体脑网络的数字表示(UBNIN)都是独特的,该方法也可应用于其他神经成像模态。PD患者的UBNIN范围为15360至17768936615460608,HC的范围为12288至17733751438064640。该模型可作为个体独特脑连接性的神经特征来实现,从而使其在脑纹识别应用中有用。此外,我们将上述数据集分为五个年龄组:A组:≤32岁(PD组1 = 4人,HC组2 = 5人),B组:33 - 42岁(PD组1 = 18人,HC组2 = 14人),C组:43 - 52岁(PD组1 = 42人,HC组2 = 23人),D组:53 - 62岁(PD组1 = 69人,HC组2 = 22人),E组:≥63岁(PD组1 = 46人,HC组2 = 6人),其中1和2分别是PD组和HC组中的个体数量,以研究网络拓扑结构随年龄的变化。采用稀疏性作为阈值估计,对每个基于年龄的相关性矩阵进行二值化处理。使用基于MATLAB(R2020a)的Brain Connectivity toolbox(版本2019 - 03 - 03)函数获得连接性指标。对于每个年龄组,随着稀疏性增加,平均聚类系数呈现下降趋势。在PD组中,年龄组B和C(稀疏性:0.63,0.66)、C和E(稀疏性:0.66,0.69)之间的聚类系数存在显著差异;在HC组中,E和B(稀疏性:0.75及以上0.81)、E和C(稀疏性高于0.78)、E和D(稀疏性高于0.84)以及C和D(稀疏性:0.9)之间的聚类系数存在显著差异。我们的研究结果表明,网络连接模式随年龄变化,这表明网络破坏可能是由于潜在的神经病理学原因。不同年龄组的聚类系数不同,表明相邻节点之间的信息传递随年龄变化。这为与年龄相关的脑萎缩和网络退化提供了证据。我们还讨论了局限性,并提供了软件代码的开放获取链接以及整个研究的帮助文件。