Institute of Tropical Medicine, University of São Paulo, São Paulo 05403-000, Brazil.
Department of Epidemiology, School of Public Health, University of São Paulo, São Paulo 01246-904, Brazil.
Genes (Basel). 2023 Aug 24;14(9):1671. doi: 10.3390/genes14091671.
Genetic diversity and population structuring for the species , a sylvatic vector of yellow fever virus, were found to vary with the degree of agricultural land use and isolation of fragments of Atlantic Forest in municipalities in the state of São Paulo where specimens were collected. Genotyping of 115 mitochondrial SNPs showed that the populations with the highest indices of genetic diversity (polymorphic loci and mean pairwise differences between the sequences) are found in areas with high levels of agricultural land use (northeast of the State). Most populations exhibited statistically significant negative values for the Tajima D and Fu FS neutrality tests, suggesting recent expansion. The results show an association between genetic diversity in this species and the degree of agricultural land use in the sampled sites, as well as signs of population expansion of this species in most areas, particularly those with the highest forest edge densities. A clear association between population structuring and the distance between the sampled fragments (isolation by distance) was observed: samples from a large fragment of Atlantic Forest extending along the coast of the state of São Paulo exhibited greater similarity with each other than with populations in the northwest of the state.
在采集标本的圣保罗州的各城市中,发现物种的遗传多样性和种群结构随农业用地程度和大西洋森林片段的隔离程度而变化,该物种是黄热病病毒的森林型媒介。对 115 个线粒体 SNP 的基因分型表明,遗传多样性指数(多态性位点和序列之间的平均成对差异)最高的种群存在于农业用地水平较高的地区(州的东北部)。大多数种群的 Tajima D 和 Fu FS 中性检验的统计显著性为负值,表明最近发生了扩张。结果表明,该物种的遗传多样性与采样地点的农业用地程度之间存在关联,以及该物种在大多数地区,特别是森林边缘密度最高的地区的种群扩张迹象。观察到种群结构与采样片段之间的距离(距离隔离)之间存在明显的关联:来自沿圣保罗州海岸延伸的一大片大西洋森林的样本彼此之间的相似性大于与该州西北部的种群之间的相似性。