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基于线粒体DNA控制区推断韩国和中国褐菖鲉的遗传多样性与种群结构

Genetic Diversity and Population Structure of Brown Croaker () in Korea and China Inferred from mtDNA Control Region.

作者信息

Gwak Woo-Seok, Roy Animesh

机构信息

Department of Marine Biology and Aquaculture, The Institute of Marine Industry, Gyeongsang National University, Tongyeong 650-160, Republic of Korea.

Department of Fisheries Biology and Aquatic Environment, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur 1706, Bangladesh.

出版信息

Genes (Basel). 2023 Aug 25;14(9):1692. doi: 10.3390/genes14091692.

Abstract

Brown croaker (), a species of fish with significant commercial value, is found in the coastal seas of Korea, China, and Japan. The genetic diversity and population structure of a representative sample of brown croaker specimens were assessed based on the control region of their mitochondrial DNA (mtDNA). Samples from a total of 115 individuals were collected from three separate locations, one in China (Lianyungang) and two in Korea (Mokpo and Gyeongnyeolbiyeoldo Island). Analysis of the 436-base-pair mtDNA control region revealed that the haplotype diversity ranged from 0.973 ± 0.025 to 0.988 ± 0.008, while the nucleotide diversity ranged from 0.012 ± 0.006 to 0.017 ± 0.009. The level of genetic diversity, star-shaped haplotype network, significant Fu's Fs test, and analysis of the mismatch distribution all suggested that this species has experienced population expansion. Fixation index analysis indicated that the population collected at the site in China differed significantly from the two populations obtained in Korea. The findings of this study extend the general understanding of the population structure of and can be used to develop strategies for effective resource management.

摘要

小黄鱼是一种具有重要商业价值的鱼类,分布于韩国、中国和日本的沿海海域。基于线粒体DNA(mtDNA)控制区,对小黄鱼标本的代表性样本的遗传多样性和种群结构进行了评估。总共从三个不同地点收集了115个个体的样本,一个在中国(连云港),两个在韩国(木浦和庆烈毗列岛)。对436个碱基对的mtDNA控制区的分析表明,单倍型多样性范围为0.973±0.025至0.988±0.008,而核苷酸多样性范围为0.012±0.006至0.017±0.009。遗传多样性水平、星形单倍型网络、显著的Fu's Fs检验以及错配分布分析均表明该物种经历了种群扩张。固定指数分析表明,在中国采集的种群与在韩国获得的两个种群有显著差异。本研究的结果扩展了对小黄鱼种群结构的一般认识,并可用于制定有效的资源管理策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e90/10530706/b76952742065/genes-14-01692-g001.jpg

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