Molecular Neurobiology Laboratory, Experimental Neuroscience, IRCCS Fondazione Santa Lucia (FSL), 00143 Rome, Italy.
Molecular Pathology Laboratory, International Centre for Genetic Engineering and Biotechnology (ICGEB), 34149 Trieste, Italy.
Int J Mol Sci. 2023 Sep 7;24(18):13807. doi: 10.3390/ijms241813807.
Since its initial involvement in numerous neurodegenerative pathologies in 2006, either as a principal actor or as a cofactor, new pathologies implicating transactive response (TAR) DNA-binding protein 43 (TDP-43) are regularly emerging also beyond the neuronal system. This reflects the fact that TDP-43 functions are particularly complex and broad in a great variety of human cells. In neurodegenerative diseases, this protein is often pathologically delocalized to the cytoplasm, where it irreversibly aggregates and is subjected to various post-translational modifications such as phosphorylation, polyubiquitination, and cleavage. Until a few years ago, the research emphasis has been focused particularly on the impacts of this aggregation and/or on its widely described role in complex RNA splicing, whether related to loss- or gain-of-function mechanisms. Interestingly, recent studies have strengthened the knowledge of TDP-43 activity at the chromatin level and its implication in the regulation of DNA transcription and stability. These discoveries have highlighted new features regarding its own transcriptional regulation and suggested additional mechanistic and disease models for the effects of TPD-43. In this review, we aim to give a comprehensive view of the potential epigenetic (de)regulations driven by (and driving) this multitask DNA/RNA-binding protein.
自 2006 年以来,TDP-43 蛋白已先后涉及多种神经退行性病变,无论是作为主要参与者还是协同因子,除了神经系统之外,还有许多新的病理也涉及到反式激活反应(TAR)DNA 结合蛋白 43(TDP-43)。这反映出这样一个事实,即 TDP-43 具有特别复杂和广泛的功能,存在于各种人类细胞中。在神经退行性疾病中,这种蛋白通常会异常定位于细胞质,在细胞质中不可逆转地聚集,并发生各种翻译后修饰,如磷酸化、多聚泛素化和切割。直到几年前,研究重点还特别集中在这种聚集的影响上,或者集中在其广泛描述的在复杂 RNA 剪接中的作用,无论是与功能丧失或获得机制有关。有趣的是,最近的研究加强了对 TDP-43 在染色质水平上的活性及其对 DNA 转录和稳定性的调节作用的认识。这些发现突出了其自身转录调节的新特征,并为 TPD-43 的作用提出了其他机制和疾病模型。在这篇综述中,我们旨在全面了解这种多功能 DNA/RNA 结合蛋白所驱动的(和驱动的)潜在表观遗传(去)调控。