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计算机模拟特定代谢物对帕金森病靶点的神经保护作用。

In Silico Neuroprotective Effects of Specific Metabolites on Parkinson's Disease Targets.

机构信息

School of Chemical, Biological, and Materials Engineering and Sciences, Mapúa University, Manila 1002, Philippines.

School of Graduate Studies, Mapúa University, Manila 1002, Philippines.

出版信息

Int J Mol Sci. 2023 Sep 11;24(18):13929. doi: 10.3390/ijms241813929.

Abstract

Parkinson's disease (PD) is one of the large-scale health issues detrimental to human quality of life, and current treatments are only focused on neuroprotection and easing symptoms. This study evaluated in silico binding activity and estimated the stability of major metabolites in the roots of (RP) with main protein targets in Parkinson's disease and their ADMET properties. The major metabolites of RP were subjected to molecular docking and QSAR with α-synuclein, monoamine oxidase isoform B, catechol -methyltransferase, and A adenosine receptor. From this, emodin had the greatest binding activity with Parkinson's disease targets. The chemical stability of the selected compounds was estimated using density functional theory analyses. The docked compounds showed good stability for inhibitory action compared to dopamine and levodopa. According to their structure-activity relationship, aloe-emodin, chrysophanol, emodin, and rhein exhibited good inhibitory activity to specific targets. Finally, mediocre pharmacokinetic properties were observed due to unexceptional blood-brain barrier penetration and safety profile. It was revealed that the major metabolites of RP may have good neuroprotective activity as an additional hit for PD drug development. Also, an association between redox-mediating and activities with PD-relevant protein targets was observed, potentially opening discussion on electrochemical mechanisms with biological functions.

摘要

帕金森病(PD)是危害人类生活质量的重大健康问题之一,目前的治疗方法仅侧重于神经保护和缓解症状。本研究评估了(RP)根部主要蛋白靶点在帕金森病中的结合活性和稳定性及其 ADMET 性质。RP 的主要代谢物进行了分子对接和与α-突触核蛋白、单胺氧化酶同工型 B、儿茶酚-O-甲基转移酶和 A 腺苷受体的 QSAR 分析。由此可知,大黄素与帕金森病靶点的结合活性最强。使用密度泛函理论分析估算了所选化合物的化学稳定性。与多巴胺和左旋多巴相比,对接化合物显示出良好的抑制作用稳定性。根据构效关系,芦荟大黄素、大黄酚、大黄素和大黄酸对特定靶点表现出良好的抑制活性。最后,由于血脑屏障通透性和安全性一般,观察到中等的药代动力学特性。结果表明,RP 的主要代谢物可能具有良好的神经保护活性,可作为 PD 药物开发的附加命中。此外,还观察到氧化还原调节活性与 PD 相关蛋白靶点之间的关联,这可能为电化学机制与生物功能的讨论开辟了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec35/10530814/d1682b991175/ijms-24-13929-g001.jpg

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