Department of Chemistry, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0373, Japan.
Int J Mol Sci. 2023 Sep 15;24(18):14135. doi: 10.3390/ijms241814135.
Drk, a homologue of human GRB2 in , receives signals from outside the cells through the interaction of its SH2 domain with the phospho-tyrosine residues in the intracellular regions of receptor tyrosine kinases (RTKs) such as Sevenless, and transduces the signals downstream through the association of its N- and C-terminal SH3 domains (Drk-NSH3 and Drk-CSH3, respectively) with proline-rich motifs (PRMs) in Son of Sevenless (Sos) or Daughter of Sevenless (Dos). Isolated Drk-NSH3 exhibits a conformational equilibrium between the folded and unfolded states, while Drk-CSH3 adopts only a folded confirmation. Drk interacts with PRMs of the PxxPxR motif in Sos and the PxxxRxxKP motif in Dos. Our previous study has shown that Drk-CSH3 can bind to Sos, but the interaction between Drk-NSH3 and Dos has not been investigated. To assess the affinities of both SH3 domains towards Sos and Dos, we conducted NMR titration experiments using peptides derived from Sos and Dos. Sos-S1 binds to Drk-NSH3 with the highest affinity, strongly suggesting that the Drk-Sos multivalent interaction is initiated by the binding of Sos-S1 and NSH3. Our results also revealed that the two Sos-derived PRMs clearly favour NSH3 for binding, whereas the two Dos-derived PRMs show almost similar affinity for NSH3 and CSH3. We have also performed docking simulations based on the chemical shift perturbations caused by the addition of Sos- and Dos-derived peptides. Finally, we discussed the various modes in the interactions of Drk with Sos/Dos.
DRK 是人类 GRB2 的同源物,通过其 SH2 结构域与受体酪氨酸激酶(RTKs)胞内区域的磷酸酪氨酸残基相互作用,从细胞外接收信号,然后通过其 N-和 C-末端 SH3 结构域(分别为 Drk-NSH3 和 Drk-CSH3)与 Son of Sevenless(Sos)或 Daughter of Sevenless(Dos)中的富含脯氨酸基序(PRM)结合,将信号转导至下游。分离的 Drk-NSH3 表现出折叠和未折叠状态之间的构象平衡,而 Drk-CSH3 仅采用折叠构象。DRK 与 Sos 中的 PxxPxR 基序和 Dos 中的 PxxxRxxKP 基序的 PRM 相互作用。我们之前的研究表明,Drk-CSH3 可以与 Sos 结合,但尚未研究 Drk-NSH3 与 Dos 之间的相互作用。为了评估两个 SH3 结构域与 Sos 和 Dos 的亲和力,我们使用源自 Sos 和 Dos 的肽进行了 NMR 滴定实验。Sos-S1 与 Drk-NSH3 结合的亲和力最高,强烈表明 Drk-Sos 多价相互作用是由 Sos-S1 和 NSH3 的结合引发的。我们的结果还表明,两个 Sos 衍生的 PRM 明显有利于 NSH3 结合,而两个 Dos 衍生的 PRM 对 NSH3 和 CSH3 的结合亲和力几乎相同。我们还根据添加 Sos 和 Dos 衍生肽引起的化学位移扰动进行了对接模拟。最后,我们讨论了 Drk 与 Sos/Dos 相互作用的各种模式。