BioBank, The First Affiliated Hospital of Xi'an Jiaotong University, Yanta District, Xi'an 710061, China.
Centre for Biobank and Advanced Medical Research of Shaanxi Province, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China.
Int J Mol Sci. 2023 Sep 20;24(18):14318. doi: 10.3390/ijms241814318.
is a model organism for studying Gram-positive bacteria and serves as a cell factory in the industry for enzyme and chemical production. Additionally, it functions as a probiotic in the gastrointestinal tract, modulating the gut microbiota. Its lytic phage SPO1 is also the most studied phage among the genus , including Bacillus phage SPO1 and Camphawk. One of the notable features of SPO1 is the existence of a "host-takeover module", a cluster of 24 genes which occupies most of the terminal redundancy. Some of the gene products from the module have been characterized, revealing their ability to disrupt host metabolism by inhibiting DNA replication, RNA transcription, cell division, and glycolysis. However, many of the gene products which share limited similarity to known proteins remain under researched. In this study, we highlight the involvement of Gp49, a gene product from the module, in host RNA binding and heme metabolism-no observation has been reported in other phages. Gp49 folds into a structure that does not resemble any protein in the database and has a new putative RNA binding motif. The transcriptome study reveals that Gp49 primarily upregulates host heme synthesis which captures cytosolic iron to facilitate phage development.
是研究革兰氏阳性菌的模式生物,在工业中作为酶和化学物质生产的细胞工厂。此外,它在胃肠道中作为益生菌发挥作用,调节肠道微生物群。它的裂解噬菌体 SPO1 也是属中研究最多的噬菌体之一,包括芽孢杆菌噬菌体 SPO1 和 Camphawk。SPO1 的一个显著特点是存在一个“宿主接管模块”,这是一个由 24 个基因组成的簇,占据了大部分末端冗余。该模块的一些基因产物已经被鉴定出来,揭示了它们通过抑制 DNA 复制、RNA 转录、细胞分裂和糖酵解来破坏宿主代谢的能力。然而,许多与已知蛋白具有有限相似性的基因产物仍在研究之中。在这项研究中,我们强调了模块中的基因产物 Gp49 参与宿主 RNA 结合和血红素代谢的作用——这在其他噬菌体中尚未有报道。Gp49 折叠成一种与数据库中任何蛋白质都不相似的结构,具有一个新的假定 RNA 结合基序。转录组研究表明,Gp49 主要上调宿主血红素合成,从而捕获胞质铁来促进噬菌体的发育。