Baek Kiwoon, Choi Ahyoung
Department of Biological Sciences and Bioengineering, Inha University, Incheon 22212, Republic of Korea.
Nakdonggang National Institute of Biological Resources, 137 Donam 2-gil, Sangju 37242, Republic of Korea.
Microorganisms. 2023 Sep 5;11(9):2237. doi: 10.3390/microorganisms11092237.
A Gram-stain-negative, non-motile, non-pigmented, rod-shaped bacterium was isolated from a freshwater sample of Nakdong River in South Korea and designated as strain BK-30. An analysis of the 16S rRNA gene sequence of strain BK-30 revealed its closest phylogenetic neighbors were members of the genus . Specifically, the strain formed a robust clade with DSM 12705, sharing 98.4% similarity in their 16S rRNA gene sequences. The average nucleotide identity value between strain BK-30 and DSM 12705 was 79.8%, and the genome-to-genome distance averaged 21.3%, indicating the representation of a novel genomic species. Strain BK-30 exhibited optimum growth at 30 °C and pH 7.0, in the absence of NaCl. The major respiratory isoprenoid quinone identified was ubiquinone-8 (Q-8). The principal fatty acids detected were C7 and/or C6 (49.6%), C (27.5%), and C7 and/or C ω6c (9.2%). The DNA G+C content of the strain was determined to be 67.3 mol%. Based on these data, we propose a novel species within the genus , named sp. nov., to accommodate the bacterial isolate. Strain BK-30 is designated as the type strain (=KCTC 52161 = JCM 31376 = FBCC-B1). Additionally, we present the isolation and complete genome sequence of a lytic phage infecting strain BK-30, named BK-30P. This bacteriophage is the first reported to infect , leading us to propose the name "Macromonasphage".
从韩国洛东江的淡水样本中分离出一种革兰氏染色阴性、无运动性、无色素、杆状的细菌,命名为BK-30菌株。对BK-30菌株的16S rRNA基因序列分析表明,其最接近的系统发育邻属为 属的成员。具体而言,该菌株与DSM 12705形成了一个稳健的进化枝,其16S rRNA基因序列相似度为98.4%。BK-30菌株与DSM 12705之间的平均核苷酸同一性值为79.8%,基因组到基因组的距离平均为21.3%,表明这是一个新的基因组物种。BK-30菌株在30℃和pH 7.0、无氯化钠的条件下生长最佳。鉴定出的主要呼吸类异戊二烯醌为泛醌-8(Q-8)。检测到的主要脂肪酸为C7和/或C6(49.6%)、C (27.5%)以及C7和/或C ω6c(9.2%)。该菌株的DNA G+C含量测定为67.3 mol%。基于这些数据,我们在 属内提出一个新物种,命名为 sp. nov.,以容纳该细菌分离株。BK-30菌株被指定为模式菌株(=KCTC 52161 = JCM 31376 = FBCC-B1)。此外,我们还展示了一种感染BK-30菌株的裂解性噬菌体BK-30P的分离和完整基因组序列。这种噬菌体是首次报道感染 的噬菌体,因此我们提议将其命名为“Macromonasphage”。