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两个ST121菌株的封闭基因组序列。

Closed genome sequences of two ST121 strains.

作者信息

Tibbs-Cortes Bienvenido W, Schultz Dylan L, Schmitz-Esser Stephan

机构信息

Department of Animal Science, Iowa State University, Ames, Iowa, USA.

Interdepartmental Microbiology Graduate Program, Iowa State University, Ames, Iowa, USA.

出版信息

Microbiol Resour Announc. 2023 Oct 19;12(10):e0075023. doi: 10.1128/MRA.00750-23. Epub 2023 Sep 28.

DOI:10.1128/MRA.00750-23
PMID:37768047
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10586163/
Abstract

We performed Oxford Nanopore and Illumina sequencing to generate accurate, closed genomes for the strains 6179 and L58-55. The new assemblies were generally similar to the previous Illumina-based assemblies, but additional rRNA operons and repeat regions were identified in the new assembly for strain 6179.

摘要

我们进行了牛津纳米孔测序和Illumina测序，以生成菌株6179和L58 - 55的准确、完整基因组。新的组装结果总体上与之前基于Illumina的组装结果相似，但在菌株6179的新组装中发现了额外的rRNA操纵子和重复区域。

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本文引用的文献

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2
Transcriptome Sequencing of Reveals Major Gene Expression Changes in Response to Lactic Acid Stress Exposure but a Less Pronounced Response to Oxidative Stress.[物种名称]的转录组测序揭示了对乳酸应激暴露的主要基因表达变化，但对氧化应激的反应不太明显。
Front Microbiol. 2020 Jan 21;10:3110. doi: 10.3389/fmicb.2019.03110. eCollection 2019.
3
Epidemiology and Clinical Manifestations of Infection.感染的流行病学和临床表现。
Microbiol Spectr. 2019 May;7(3). doi: 10.1128/microbiolspec.GPP3-0014-2018.
4
Plasmids contribute to food processing environment-associated stress survival in three Listeria monocytogenes ST121, ST8, and ST5 strains.质粒有助于三种单核细胞增生李斯特氏菌 ST121、ST8 和 ST5 菌株在食品加工环境相关应激中的存活。
Int J Food Microbiol. 2019 Jun 16;299:39-46. doi: 10.1016/j.ijfoodmicro.2019.03.016. Epub 2019 Mar 29.
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