Boecker Simon, Schulze Peter, Klamt Steffen
Analysis and Redesign of Biological Networks, Max Planck Institute for Dynamics of Complex Technical Systems, Sandtorstr. 1, 39106, Magdeburg, Germany.
University of Applied Sciences Berlin, Seestr. 64, 13347, Berlin, Germany.
Biotechnol Biofuels Bioprod. 2023 Oct 3;16(1):148. doi: 10.1186/s13068-023-02395-z.
The microbial production of isobutanol holds promise to become a sustainable alternative to fossil-based synthesis routes for this important chemical. Escherichia coli has been considered as one production host, however, due to redox imbalance, growth-coupled anaerobic production of isobutanol from glucose in E. coli is only possible if complex media additives or small amounts of oxygen are provided. These strategies have a negative impact on product yield, productivity, reproducibility, and production costs.
In this study, we propose a strategy based on acetate as co-substrate for resolving the redox imbalance. We constructed the E. coli background strain SB001 (ΔldhA ΔfrdA ΔpflB) with blocked pathways from glucose to alternative fermentation products but with an enabled pathway for acetate uptake and subsequent conversion to ethanol via acetyl-CoA. This strain, if equipped with the isobutanol production plasmid pIBA4, showed robust exponential growth (µ = 0.05 h) under anaerobic conditions in minimal glucose medium supplemented with small amounts of acetate. In small-scale batch cultivations, the strain reached a glucose uptake rate of 4.8 mmol gDW h, a titer of 74 mM and 89% of the theoretical maximal isobutanol/glucose yield, while secreting only small amounts of ethanol synthesized from acetate. Furthermore, we show that the strain keeps a high metabolic activity also in a pulsed fed-batch bioreactor cultivation, even if cell growth is impaired by the accumulation of isobutanol in the medium.
This study showcases the beneficial utilization of acetate as a co-substrate and redox sink to facilitate growth-coupled production of isobutanol under anaerobic conditions. This approach holds potential for other applications with different production hosts and/or substrate-product combinations.
微生物生产异丁醇有望成为这种重要化学品基于化石合成路线的可持续替代方法。大肠杆菌已被视为一种生产宿主,然而,由于氧化还原失衡,只有在提供复杂培养基添加剂或少量氧气的情况下,大肠杆菌才能从葡萄糖中厌氧生长偶联生产异丁醇。这些策略对产品产量、生产率、可重复性和生产成本有负面影响。
在本研究中,我们提出了一种基于乙酸盐作为共底物来解决氧化还原失衡的策略。我们构建了大肠杆菌背景菌株SB001(ΔldhA ΔfrdA ΔpflB),其阻断了从葡萄糖到替代发酵产物的途径,但具有乙酸盐摄取和随后通过乙酰辅酶A转化为乙醇的途径。该菌株如果配备异丁醇生产质粒pIBA4,在补充少量乙酸盐的基本葡萄糖培养基中厌氧条件下显示出强劲的指数生长(µ = 0.05 h)。在小规模分批培养中,该菌株的葡萄糖摄取率达到4.8 mmol gDW h,滴度为74 mM,异丁醇/葡萄糖产率为理论最大值的89%,同时仅分泌少量由乙酸盐合成的乙醇。此外,我们表明,即使培养基中异丁醇的积累会损害细胞生长,该菌株在脉冲补料分批生物反应器培养中也保持高代谢活性。
本研究展示了乙酸盐作为共底物和氧化还原汇的有益利用,以促进厌氧条件下生长偶联的异丁醇生产。这种方法在其他具有不同生产宿主和/或底物 - 产物组合的应用中具有潜力。