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探索岩高兰科毛状根内生真菌的结构和分子多样性:对北波希米亚和阿根廷巴塔哥尼亚的比较。

Exploring structural and molecular diversity of Ericaceae hair root mycobionts: a comparison between Northern Bohemia and Argentine Patagonia.

机构信息

Department of Mycorrhizal Symbioses, Institute of Botany, Czech Academy of Sciences, Průhonice, Czechia.

Laboratorio de Microbiología Aplicada y Biotecnología, Centro Regional Universitario Bariloche, IPATEC (Universidad Nacional del Comahue-CONICET), San Carlos de Bariloche, Río Negro, Argentina.

出版信息

Mycorrhiza. 2023 Nov;33(5-6):425-447. doi: 10.1007/s00572-023-01125-5. Epub 2023 Oct 4.

DOI:10.1007/s00572-023-01125-5
PMID:37792114
Abstract

Core Ericaceae produce delicate hair roots with inflated rhizodermal cells that host plethora of fungal symbionts. These poorly known mycobionts include various endophytes, parasites, saprobes, and the ericoid mycorrhizal (ErM) fungi (ErMF) that form the ErM symbiosis crucial for the fitness of their hosts. Using microscopy and high-throughput sequencing, we investigated their structural and molecular diversity in 14 different host × site combinations in Northern Bohemia (Central Europe) and Argentine Patagonia (South America). While we found typical ericoid mycorrhiza in all combinations, we did not detect ectomycorrhiza and arbuscular mycorrhiza. Superficial mantles of various thickness formed by non-clamped hyphae were observed in all combinations except Calluna vulgaris from N. Bohemia. Some samples contained frequent intercellular hyphae while others possessed previously unreported intracellular haustoria-like structures linked with intracellular hyphal coils. The 711 detected fungal OTU were dominated by Ascomycota (563) and Basidiomycota (119), followed by four other phyla. Ascomycetes comprised Helotiales (255), Pleosporales (53), Chaetothyriales (42), and other 19 orders, while basidiomycetes Sebacinales (42), Agaricales (28), Auriculariales (7), and other 14 orders. While many dominant OTU from both hemispheres lacked close relatives in reference databases, many were very similar to identical to unnamed sequences from around the world. On the other hand, several significant ericaceous mycobionts were absent in our dataset, incl. Cairneyella, Gamarada, Kurtia, Lachnum, and Leohumicola. Most of the detected OTU could not be reliably linked to a particular trophic mode, and only two could be reliably assigned to the archetypal ErMF Hyaloscypha hepaticicola. Probable ErMF comprised Hyaloscypha variabilis and Oidiodendron maius, both detected only in N. Bohemia. Possible ErMF comprised sebacinoid fungi and several unnamed members of Hyaloscypha s. str. While H. hepaticicola was dominant only in C. vulgaris, this model ErM host lacked O. maius and sebacinoid mycobionts. Hyaloscypha hepaticicola was absent in two and very rare in six combinations from Patagonia. Nine OTU represented dark septate endophytes from the Phialocephala fortinii s. lat.-Acephala applanata species complex, including the most abundant OTU (the only detected in all combinations). Statistical analyses revealed marked differences between N. Bohemia and Patagonia, but also within Patagonia, due to the unique community detected in a Valdivian temperate rainforest. Our results show that the ericaceous hair roots may host diverse mycobionts with mostly unknown functions and indicate that many novel ErMF lineages await discovery. Transhemispheric differences (thousands of km) in their communities may be evenly matched by local differences (scales of km, m, and less).

摘要

核心石南科植物产生纤细的毛发状根,根皮层细胞膨胀,宿主有大量真菌共生体。这些鲜为人知的真菌共生体包括各种内生菌、寄生虫、腐生菌和形成石南科菌根(ErM)共生体的 ErM 真菌(ErMF),该共生体对其宿主的适应性至关重要。使用显微镜和高通量测序,我们研究了在北波希米亚(中欧)和阿根廷巴塔哥尼亚(南美洲)的 14 个不同宿主×地点组合中它们的结构和分子多样性。虽然我们在所有组合中都发现了典型的石南科菌根,但我们没有检测到外生菌根和丛枝菌根。除了北波希米亚的普通帚石楠外,所有组合中都观察到由非夹紧菌丝形成的各种厚度的表层套膜。一些样品中含有频繁的细胞间菌丝,而另一些样品则具有以前未报道的与细胞内菌丝线圈相连的细胞内类吸器结构。检测到的 711 个真菌 OTU 主要由子囊菌门(563)和担子菌门(119)组成,其次是其他四个门。子囊菌门包括Helotiales(255)、Pleosporales(53)、Chaetothyriales(42)和其他 19 个目,而担子菌门包括Sebacinales(42)、Agaricales(28)、Auriculariales(7)和其他 14 个目。虽然来自两个半球的许多优势 OTU 在参考数据库中缺乏近亲,但许多与世界各地未命名的序列非常相似或相同。另一方面,我们的数据集中缺少几个重要的石南科真菌共生体,包括 Cairneyella、Gamarada、Kurtia、Lachnum 和 Leohumicola。大多数检测到的 OTU 无法可靠地与特定的营养模式联系起来,只有两个可以可靠地分配给典型的 ErMF Hyaloscypha hepaticicola。可能的 ErMF 包括 Hyaloscypha variabilis 和 Oidiodendron maius,两者仅在北波希米亚被检测到。可能的 ErMF 包括 sebacinoid 真菌和几个未命名的 Hyaloscypha s. str.成员。虽然 Hyaloscypha hepaticicola 仅在普通帚石楠中占优势,但这种模式的 ErM 宿主缺乏 O. maius 和 sebacinoid 真菌共生体。Hyaloscypha hepaticicola 在巴塔哥尼亚的两个组合和六个组合中非常罕见。9 个 OTU 代表 Phialocephala fortinii s. lat.-Acephala applanata 种复合体中的深色隔孢腔内生菌,包括最丰富的 OTU(所有组合中唯一检测到的 OTU)。统计分析显示,北波希米亚和巴塔哥尼亚之间存在明显差异,但由于在瓦尔迪维亚温带雨林中检测到独特的群落,巴塔哥尼亚内部也存在差异。我们的结果表明,石南科毛发状根可能宿主多样化的真菌共生体,其功能大多未知,并表明许多新的 ErMF 谱系有待发现。它们群落的跨半球差异(数千公里)可能与局部差异(公里、米和更小的尺度)相匹配。

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