Suppr超能文献

通过面部表型评分促进罕见遗传疾病的分子诊断。

Facilitating the Molecular Diagnosis of Rare Genetic Disorders Through Facial Phenotypic Scores.

机构信息

Institut für Genomische Statistik und Bioinformatik, Universitätsklinikum Bonn, Rheinische Friedrich-Wilhelms-Universität Bonn, Bonn, Germany.

Institut für Humangenetik, Universitätsklinikum Bonn, Universität Bonn, Bonn, Germany.

出版信息

Curr Protoc. 2023 Oct;3(10):e906. doi: 10.1002/cpz1.906.

Abstract

With recent advances in computer vision, many applications based on artificial intelligence have been developed to facilitate the diagnosis of rare genetic disorders through the analysis of patients' two-dimensional frontal images. Some of these have been implemented on online platforms with user-friendly interfaces and provide facial analysis services, such as Face2Gene. However, users cannot run the facial analysis processes in house because the training data and the trained models are unavailable. This article therefore provides an introduction, designed for users with programming backgrounds, to the use of the open-source GestaltMatcher approach to run facial analysis in their local environment. The Basic Protocol provides detailed instructions for applying for access to the trained models and then performing facial analysis to obtain a prediction score for each of the 595 genes in the GestaltMatcher Database. The prediction results can then be used to narrow down the search space of disease-causing mutations or further connect with a variant-prioritization pipeline. © 2023 The Authors. Current Protocols published by Wiley Periodicals LLC. Basic Protocol: Using the open-source GestaltMatcher approach to perform facial analysis.

摘要

随着计算机视觉技术的最新进展,许多基于人工智能的应用程序已经开发出来,通过分析患者的二维正面图像来帮助诊断罕见的遗传疾病。其中一些已经在具有用户友好界面的在线平台上实现,并提供面部分析服务,如 Face2Gene。然而,由于无法获得训练数据和训练好的模型,用户无法在本地运行面部分析流程。因此,本文为具有编程背景的用户提供了一个介绍,介绍如何使用开源的 GestaltMatcher 方法在本地环境中运行面部分析。基本方案提供了详细的说明,介绍如何申请访问训练好的模型,然后进行面部分析,为 GestaltMatcher 数据库中的 595 个基因中的每个基因获得预测分数。然后,可以使用预测结果缩小致病突变的搜索空间,或进一步与变体优先级处理管道连接。© 2023 作者。Wiley Periodicals LLC 出版的《当代协议》。基本方案:使用开源的 GestaltMatcher 方法进行面部分析。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验