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唾液混合槟榔咀嚼物滤液衍生的有机酸被预测为一种10-11易位蛋白2抑制剂。

Organic Acids Derived from Saliva-amalgamated Betel Quid Filtrate Are Predicted as a Ten-eleven Translocation-2 Inhibitor.

作者信息

Bhatkar Devyani, Ananda Nistha, Lokhande Kiran Bharat, Khunteta Kratika, Jain Priyadarshini, Hebale Ameya, Sarode Sachin C, Sharma Nilesh Kumar

机构信息

Cancer and Translational Research Lab, Dr. D. Y. Patil Biotechnology & Bioinformatics Institute, Dr. D. Y. Patil Vidyapeeth, Pune, India.

Bioinformatics Research Laboratory, Dr. D. Y. Patil Biotechnology and Bioinformatics Institute, Dr. D. Y. Patil Vidyapeeth, Pune, India.

出版信息

J Cancer Prev. 2023 Sep 30;28(3):115-130. doi: 10.15430/JCP.2023.28.3.115.

Abstract

There is a lack of evidence regarding the use of betel quid (BQ) and its potential contribution to oral cancer. Limited attention has been directed towards investigating the involvement of BQ-derived organic acids in the modulation of metabolic-epigenomic pathways associated with oral cancer initiation and progression. We employed novel protocol for preparing saliva-amalgamated BQ filtrate (SABFI) that mimics the oral cavity environment. SABFI and saliva control were further purified by an in-house developed vertical tube gel electrophoresis tool. The purified SABFI was then subjected to liquid chromatography-high resolution mass spectrometry analysis to identify the presence of organic acids. Profiling of SABFI showed a pool of prominent organic acids such as citric acid. malic acid, fumaric acid, 2-methylcitric acid, 2-hydroxyglutarate, aconitic acid, succinic acid, 2-hydroxyglutaric acid lactone, tartaric acid and β-ketoglutaric acid. SABFI showed anti-proliferative and early apoptosis effects in oral cancer cells. Molecular docking and molecular dynamics simulations predicted that SABFI-derived organic acids as potential inhibitors of the epigenetic demethylase enzyme, Ten-Eleven Translocation-2 (TET2). By binding to the active site of α-ketoglutarate, a known substrate of TET2, these organic acids are likely to act as competitive inhibitors. This study reports a novel approach to study SABFI-derived organic acids that could mimic the chemical composition of BQ in the oral cavity. These SABFI-derived organic acids projected as inhibitors of TET2 and could be explored for their role oral cancer.

摘要

关于槟榔咀嚼物(BQ)的使用及其对口腔癌的潜在影响,目前缺乏证据。对于研究BQ衍生的有机酸在与口腔癌发生和发展相关的代谢-表观基因组途径调节中的作用,关注较少。我们采用了一种新的方案来制备模拟口腔环境的唾液混合BQ滤液(SABFI)。SABFI和唾液对照通过内部开发的垂直管凝胶电泳工具进一步纯化。然后对纯化后的SABFI进行液相色谱-高分辨率质谱分析,以鉴定有机酸的存在。SABFI的分析显示出一系列显著的有机酸,如柠檬酸、苹果酸、富马酸、2-甲基柠檬酸、2-羟基戊二酸、乌头酸、琥珀酸、2-羟基戊二酸内酯、酒石酸和β-酮戊二酸。SABFI在口腔癌细胞中显示出抗增殖和早期凋亡作用。分子对接和分子动力学模拟预测,SABFI衍生的有机酸是表观遗传去甲基化酶十一-易位-2(TET2)的潜在抑制剂。通过与TET2的已知底物α-酮戊二酸的活性位点结合,这些有机酸可能作为竞争性抑制剂起作用。本研究报告了一种研究SABFI衍生有机酸的新方法,该方法可以模拟口腔中BQ的化学成分。这些SABFI衍生的有机酸被预测为TET2的抑制剂,可以探索它们在口腔癌中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8297/10564634/909c1a27b546/jcp-28-3-115-f1.jpg

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