Facultad de Ciencias Químicas, Universidad Autónoma de Chihuahua, Chihuahua 31125, Mexico.
Molecules. 2023 Sep 23;28(19):6778. doi: 10.3390/molecules28196778.
A theoretical analysis of the potential inhibition of human sucrase-isomaltase (SI) by flavonoids was carried out with the aim of identifying potential candidates for an alternative treatment of type 2 diabetes. Two compounds from maize silks, maysin and luteolin, were selected to be studied with the structure-based density functional theory (DFT), molecular docking (MDock), and molecular dynamics (MD) approaches. The docking score and MD simulations suggested that the compounds maysin and luteolin presented higher binding affinities in N-terminal sucrase-isomaltase (NtSI) than in C-terminal sucrase-isomaltase (CtSI). The reactivity parameters, such as chemical hardness (η) and chemical potential (µ), of the ligands, as well as of the active site amino acids of the NtSI, were calculated by the meta-GGA M06 functional in combination with the 6-31G(d) basis set. The lower value of chemical hardness calculated for the maysin molecule indicated that this might interact more easily with the active site of NtSI, in comparison with the values of the acarbose and luteolin structures. Additionally, a possible oxidative process was proposed through the quantum chemical calculations of the electronic charge transfer values (∆N) between the active site amino acids of the NtSI and the ligands. In addition, maysin displayed a higher ability to generate more oxidative damage in the NtSI active site. Our results suggest that maysin and luteolin can be used to develop novel α-glucosidase inhibitors via NtSI inhibition.
采用基于理论的密度泛函理论(DFT)、分子对接(MDock)和分子动力学(MD)方法,对黄酮类化合物潜在抑制人蔗糖酶-异麦芽糖酶(SI)的作用进行了理论分析,旨在寻找 2 型糖尿病替代治疗的潜在候选药物。选择来自玉米丝的两种化合物,maysin 和木犀草素,进行研究。对接评分和 MD 模拟表明,化合物 maysin 和木犀草素在 N 端蔗糖酶-异麦芽糖酶(NtSI)中的结合亲和力高于 C 端蔗糖酶-异麦芽糖酶(CtSI)。通过使用 meta-GGA M06 功能与 6-31G(d)基组相结合,计算了配体以及 NtSI 活性位点氨基酸的反应性参数,如化学硬度(η)和化学势(µ)。与阿卡波糖和木犀草素结构的值相比,计算出的 maysin 分子的化学硬度值较低,表明它可能更容易与 NtSI 的活性位点相互作用。此外,通过计算 NtSI 活性位点的氨基酸与配体之间的电子电荷转移值(∆N),提出了一种可能的氧化过程。此外,maysin 显示出在 NtSI 活性部位产生更多氧化损伤的更高能力。我们的研究结果表明,maysin 和木犀草素可以通过抑制 NtSI 来开发新型的α-葡萄糖苷酶抑制剂。