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一种基于智能手机的连续流动数字液滴环介导等温扩增平台,用于高通量、低成本定量检测核酸靶标。

A Smartphone-Enabled Continuous Flow Digital Droplet LAMP Platform for High Throughput and Inexpensive Quantitative Detection of Nucleic Acid Targets.

机构信息

Department of Chemical and Environmental Engineering, University of Cincinnati, Cincinnati, OH 45221, USA.

Digital Futures, University of Cincinnati, Cincinnati, OH 45221, USA.

出版信息

Sensors (Basel). 2023 Oct 8;23(19):8310. doi: 10.3390/s23198310.

Abstract

Molecular tests for infectious diseases and genetic anomalies, which account for significant global morbidity and mortality, are central to nucleic acid analysis. In this study, we present a digital droplet LAMP (ddLAMP) platform that offers a cost-effective and portable solution for such assays. Our approach integrates disposable 3D-printed droplet generator chips with a consumer smartphone equipped with a custom image analysis application for conducting ddLAMP assays, thereby eliminating the necessity for expensive and complicated photolithographic techniques, optical microscopes, or flow cytometers. Our 3D printing technique for microfluidic chips facilitates rapid chip fabrication in under 2 h, without the complications of photolithography or chip bonding. The platform's heating mechanism incorporates low-powered miniature heating blocks with dual resistive cartridges, ensuring rapid and accurate temperature modulation in a compact form. Instrumentation is further simplified by integrating miniaturized magnification and fluorescence optics with a smartphone camera. The fluorescence quantification benefits from our previously established RGB to CIE-xyY transformation, enhancing signal dynamic range. Performance assessment of our ddLAMP system revealed a limit of detection at 10 copies/μL, spanning a dynamic range up to 10 copies/μL. Notably, experimentally determined values of the fraction of positive droplets for varying DNA concentrations aligned with the anticipated exponential trend per Poisson statistics. Our holistic ddLAMP platform, inclusive of chip production, heating, and smartphone-based droplet evaluation, provides a refined method compatible with standard laboratory environments, alleviating the challenges of traditional photolithographic methods and intricate droplet microfluidics expertise.

摘要

分子检测技术在传染病和遗传异常诊断方面发挥着重要作用,而这些疾病和异常正是造成全球高发病率和高死亡率的主要原因。核酸分析是分子检测技术的关键。在本研究中,我们提出了一种数字液滴环介导等温扩增(ddLAMP)平台,为这些检测提供了一种经济实用且便携的解决方案。我们的方法集成了一次性 3D 打印液滴生成器芯片和配备定制图像分析应用程序的消费级智能手机,从而消除了对昂贵且复杂的光刻技术、光学显微镜或流式细胞仪的需求。我们的 3D 打印微流控芯片技术能够在不到 2 小时的时间内快速制造芯片,避免了光刻和芯片键合的复杂性。该平台的加热机制采用了低功率微型加热块和双电阻夹,以紧凑的形式实现了快速而精确的温度调节。通过将微型化的放大和荧光光学与智能手机摄像头集成,进一步简化了仪器。荧光定量受益于我们之前建立的 RGB 到 CIE-xyY 转换,增强了信号动态范围。我们的 ddLAMP 系统性能评估显示,检测限为 10 拷贝/μL,动态范围高达 10 拷贝/μL。值得注意的是,对于不同 DNA 浓度的阳性液滴分数的实验值与泊松统计预期的指数趋势相吻合。我们的整体 ddLAMP 平台,包括芯片制造、加热和基于智能手机的液滴评估,提供了一种与标准实验室环境兼容的改良方法,缓解了传统光刻方法和复杂液滴微流控专业知识的挑战。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a031/10575248/325eee0bb6f5/sensors-23-08310-g006.jpg

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