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单细胞和批量转录组分析确定了肝细胞癌的氧化应激反应相关特征。

Single cell and bulk transcriptome analysis identified oxidative stress response-related features of Hepatocellular Carcinoma.

作者信息

Zhang Shuqiao, Li Xinyu, Zheng Yilu, Liu Jiahui, Hu Hao, Zhang Shijun, Kuang Weihong

机构信息

First Affiliated Hospital of Guangzhou University of Chinese Medicine, Guangzhou University of Chinese Medicine, Guangzhou, Guangdong, China.

Department of Hematology, The Seventh Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China.

出版信息

Front Cell Dev Biol. 2023 Sep 28;11:1191074. doi: 10.3389/fcell.2023.1191074. eCollection 2023.

DOI:10.3389/fcell.2023.1191074
PMID:37842089
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10568628/
Abstract

Hepatocellular Carcinoma (HCC) is a common lethal digestive system tumor. The oxidative stress mechanism is crucial in the HCC genesis and progression. Our study analyzed single-cell and bulk sequencing data to compare the microenvironment of non-tumor liver tissues and HCC tissues. Through these analyses, we aimed to investigate the effect of oxidative stress on cells in the HCC microenvironment and identify critical oxidative stress response-related genes that impact the survival of HCC patients. Our results showed increased oxidative stress in HCC tissue compared to non-tumor tissue. Immune cells in the HCC microenvironment exhibited higher oxidative detoxification capacity, and oxidative stress-induced cell death of dendritic cells was attenuated. HCC cells demonstrated enhanced communication with immune cells through the MIF pathway in a highly oxidative hepatoma microenvironment. Meanwhile, using machine learning and Cox regression screening, we identified PRDX1 as a predictor of early occurrence and prognosis in patients with HCC. The expression level of PRDX1 in HCC was related to dysregulated ribosome biogenesis and positively correlated with the expression of immunological checkpoints (PDCD1LG2, CTLA4, TIGIT, LAIR1). High PRDX1 expression in HCC patients correlated with better sensitivity to immunotherapy agents such as sorafenib, IGF-1R inhibitor, and JAK inhibitor. In conclusion, our study unveiled variations in oxidative stress levels between non-tumor liver and HCC tissues. And we identified oxidative stress gene markers associated with hepatocarcinogenesis development, offering novel insights into the oxidative stress response mechanism in HCC.

摘要

肝细胞癌(HCC)是一种常见的致命性消化系统肿瘤。氧化应激机制在HCC的发生和发展中至关重要。我们的研究分析了单细胞和批量测序数据,以比较非肿瘤肝组织和HCC组织的微环境。通过这些分析,我们旨在研究氧化应激对HCC微环境中细胞的影响,并确定影响HCC患者生存的关键氧化应激反应相关基因。我们的结果显示,与非肿瘤组织相比,HCC组织中的氧化应激增加。HCC微环境中的免疫细胞表现出更高的氧化解毒能力,并且氧化应激诱导的树突状细胞死亡减弱。在高度氧化的肝癌微环境中,HCC细胞通过MIF途径与免疫细胞的通讯增强。同时,通过机器学习和Cox回归筛选,我们确定PRDX1为HCC患者早期发生和预后的预测指标。HCC中PRDX1的表达水平与核糖体生物合成失调有关,并且与免疫检查点(PDCD1LG2、CTLA4、TIGIT、LAIR1)的表达呈正相关。HCC患者中PRDX1的高表达与对索拉非尼、IGF-1R抑制剂和JAK抑制剂等免疫治疗药物的更好敏感性相关。总之

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本文引用的文献

1
Gene signature developed for predicting early relapse and survival in early-stage pancreatic cancer.用于预测早期胰腺癌早期复发和生存的基因特征。
BJS Open. 2023 May 5;7(3). doi: 10.1093/bjsopen/zrad031.
2
Cellular senescence-related gene signature as a valuable predictor of prognosis in hepatocellular carcinoma.细胞衰老相关基因特征可作为肝细胞癌预后的有价值预测指标。
Aging (Albany NY). 2023 Apr 13;15(8):3064-3093. doi: 10.18632/aging.204658.
3
Mitochondria in health, disease, and aging.线粒体在健康、疾病和衰老中的作用。
免疫细胞与肝细胞癌之间的因果关系:一项孟德尔随机化研究
J Cancer. 2024 Jun 3;15(13):4219-4231. doi: 10.7150/jca.96744. eCollection 2024.
Physiol Rev. 2023 Oct 1;103(4):2349-2422. doi: 10.1152/physrev.00058.2021. Epub 2023 Apr 6.
4
A generalized non-linear model predicting efficacy of neoadjuvant therapy in HER2+ breast cancer.一种预测HER2阳性乳腺癌新辅助治疗疗效的广义非线性模型。
iScience. 2023 Mar 2;26(4):106330. doi: 10.1016/j.isci.2023.106330. eCollection 2023 Apr 21.
5
Improved prognostic prediction model for liver cancer based on biomarker data screened by combined methods.基于联合方法筛选的生物标志物数据的肝癌预后预测模型的改进。
Math Biosci Eng. 2023 Jan 11;20(3):5316-5332. doi: 10.3934/mbe.2023246.
6
A molecular classification of gastric cancer associated with distinct clinical outcomes and validated by an XGBoost-based prediction model.一种与不同临床结局相关且经基于XGBoost的预测模型验证的胃癌分子分类。
Mol Ther Nucleic Acids. 2022 Dec 27;31:224-240. doi: 10.1016/j.omtn.2022.12.014. eCollection 2023 Mar 14.
7
Hepatocellular Carcinoma: New Developments.肝细胞癌:新进展。
Clin Liver Dis. 2023 Feb;27(1):85-102. doi: 10.1016/j.cld.2022.08.004. Epub 2022 Oct 18.
8
Influences The Occurrence and Progression of Liver Cancer by Inhibiting Mitochondrial Apoptosis Pathway.通过抑制线粒体凋亡途径影响肝癌的发生和发展。
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9
Beyond ANOVA and MANOVA for repeated measures: Advantages of generalized estimated equations and generalized linear mixed models and its use in neuroscience research.超越重复测量方差分析和多变量方差分析:广义估计方程和广义线性混合模型的优势及其在神经科学研究中的应用
Eur J Neurosci. 2022 Dec;56(12):6089-6098. doi: 10.1111/ejn.15858. Epub 2022 Nov 14.
10
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Lancet. 2022 Oct 15;400(10360):1345-1362. doi: 10.1016/S0140-6736(22)01200-4. Epub 2022 Sep 6.