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随机细胞群体动力学模型定量描述了结肠隐窝中的动态平衡及其在早期肿瘤发生中的破坏。

Stochastic model for cell population dynamics quantifies homeostasis in colonic crypts and its disruption in early tumorigenesis.

机构信息

Department of Applied Mathematics, University of Washington, Seattle, WA 98195, USA.

出版信息

Proc Biol Sci. 2023 Oct 25;290(2009):20231020. doi: 10.1098/rspb.2023.1020. Epub 2023 Oct 18.

DOI:10.1098/rspb.2023.1020
PMID:37848058
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10581771/
Abstract

The questions of how healthy colonic crypts maintain their size, and how homeostasis is disrupted by driver mutations, are central to understanding colorectal tumorigenesis. We propose a three-type stochastic branching process, which accounts for stem, transit-amplifying (TA) and fully differentiated (FD) cells, to model the dynamics of cell populations residing in colonic crypts. Our model is simple in its formulation, allowing us to estimate all but one of the model parameters from the literature. Fitting the single remaining parameter, we find that model results agree well with data from healthy human colonic crypts, capturing the considerable variance in population sizes observed experimentally. Importantly, our model predicts a steady-state population in healthy colonic crypts for relevant parameter values. We show that and mutations, the most significant early alterations leading to colorectal cancer, result in increased steady-state populations in mutated crypts, in agreement with experimental results. Finally, our model predicts a simple condition for unbounded growth of cells in a crypt, corresponding to colorectal malignancy. This is predicted to occur when the division rate of TA cells exceeds their differentiation rate, with implications for therapeutic cancer prevention strategies.

摘要

结肠隐窝中健康的隐窝如何维持其大小,以及其体内平衡如何被驱动突变所破坏,这些问题是理解结直肠肿瘤发生的核心。我们提出了一个三类型随机分支过程,它考虑了干细胞、过渡扩增(TA)和完全分化(FD)细胞,以模拟结肠隐窝中细胞群体的动力学。我们的模型在其公式中很简单,使我们能够从文献中估计除一个模型参数之外的所有参数。拟合唯一剩下的参数,我们发现模型结果与来自健康人类结肠隐窝的数据非常吻合,捕获了实验中观察到的相当大的群体大小变化。重要的是,我们的模型预测了健康结肠隐窝中的稳定群体状态。我们表明, 和 突变是导致结直肠癌的最重要的早期改变,导致突变隐窝中的稳定群体增加,这与实验结果一致。最后,我们的模型预测了隐窝中细胞无限制生长的简单条件,对应于结直肠恶性肿瘤。当 TA 细胞的分裂率超过其分化率时,就会出现这种情况,这对癌症预防策略具有重要意义。

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Transit Amplifying Cells (TACs): a still not fully understood cell population.过渡放大细胞(TACs):一种仍未被完全理解的细胞群体。
Front Bioeng Biotechnol. 2023 May 9;11:1189225. doi: 10.3389/fbioe.2023.1189225. eCollection 2023.
2
Waiting times in a branching process model of colorectal cancer initiation.结直肠癌发生的分支过程模型中的等待时间。
Theor Popul Biol. 2023 Jun;151:44-63. doi: 10.1016/j.tpb.2023.04.001. Epub 2023 Apr 24.
3
Role of Wnt signaling in the maintenance and regeneration of the intestinal epithelium.Wnt信号通路在肠道上皮维持与再生中的作用。
Curr Top Dev Biol. 2023;153:281-326. doi: 10.1016/bs.ctdb.2023.01.001. Epub 2023 Feb 1.
4
Delineating the evolutionary dynamics of cancer from theory to reality.描绘癌症从理论到现实的进化动力学。
Nat Cancer. 2020 Jun;1(6):580-588. doi: 10.1038/s43018-020-0079-6. Epub 2020 Jun 22.
5
Quantification of the Selective Advantage of Driver Mutations Is Dependent on the Underlying Model and Stage of Tumor Evolution.驱动突变的选择优势的量化取决于肿瘤进化的基础模型和阶段。
Cancer Res. 2022 Jan 1;82(1):21-24. doi: 10.1158/0008-5472.CAN-21-1064.
6
Fluctuating methylation clocks for cell lineage tracing at high temporal resolution in human tissues.在人类组织中以高时间分辨率进行细胞谱系追踪的波动甲基化时钟。
Nat Biotechnol. 2022 May;40(5):720-730. doi: 10.1038/s41587-021-01109-w. Epub 2022 Jan 3.
7
Apc-mutant cells act as supercompetitors in intestinal tumour initiation.APC 突变细胞在肠道肿瘤起始中充当超级竞争者。
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