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翅旁干涉纹(WIPs)与机器学习在一些医学关注的伊蚊种分类上的应用。

Wing Interferential Patterns (WIPs) and machine learning for the classification of some Aedes species of medical interest.

机构信息

Direction des affaires sanitaires et sociales de la Nouvelle-Calédonie, Nouméa, France.

ETIS UMR 8051, Cergy Paris University, ENSEA, CNRS, 95000, Cergy, France.

出版信息

Sci Rep. 2023 Oct 17;13(1):17628. doi: 10.1038/s41598-023-44945-3.

Abstract

Hematophagous insects belonging to the Aedes genus are proven vectors of viral and filarial pathogens of medical interest. Aedes albopictus is an increasingly important vector because of its rapid worldwide expansion. In the context of global climate change and the emergence of zoonotic infectious diseases, identification tools with field application are required to strengthen efforts in the entomological survey of arthropods with medical interest. Large scales and proactive entomological surveys of Aedes mosquitoes need skilled technicians and/or costly technical equipment, further puzzled by the vast amount of named species. In this study, we developed an automatic classification system of Aedes species by taking advantage of the species-specific marker displayed by Wing Interferential Patterns. A database holding 494 photomicrographs of 24 Aedes spp. from which those documented with more than ten pictures have undergone a deep learning methodology to train a convolutional neural network and test its accuracy to classify samples at the genus, subgenus, and species taxonomic levels. We recorded an accuracy of 95% at the genus level and > 85% for two (Ochlerotatus and Stegomyia) out of three subgenera tested. Lastly, eight were accurately classified among the 10 Aedes sp. that have undergone a training process with an overall accuracy of > 70%. Altogether, these results demonstrate the potential of this methodology for Aedes species identification and will represent a tool for the future implementation of large-scale entomological surveys.

摘要

属于伊蚊属的吸血昆虫已被证实是具有医学意义的病毒和丝虫病原体的媒介。由于其在全球范围内的迅速扩张,白纹伊蚊成为一种日益重要的媒介。在全球气候变化和人畜共患传染病出现的背景下,需要具有现场应用能力的鉴定工具来加强对具有医学意义的节肢动物的昆虫学调查工作。大规模的、积极主动的白纹伊蚊昆虫学调查需要有技术熟练的技术人员和/或昂贵的技术设备,而大量命名的物种则进一步增加了难度。在本研究中,我们利用 Wing Interferential Patterns 显示的物种特异性标记,开发了一种自动分类系统来对伊蚊属进行分类。该数据库包含了 494 张 24 种伊蚊属的显微照片,其中记录超过十张照片的蚊种经过深度学习方法进行训练,以训练卷积神经网络,并测试其在属、亚属和种分类水平上对样本进行分类的准确性。我们记录的属分类准确率为 95%,在测试的三个亚属中,有两个(库蚊亚属和按蚊亚属)的准确率超过 85%。最后,在经过训练过程的 10 种伊蚊属中,有 8 种被准确分类,总体准确率超过 70%。总的来说,这些结果表明了该方法在伊蚊属物种鉴定方面的潜力,将成为未来大规模昆虫学调查的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99ec/10582169/8b83c514126f/41598_2023_44945_Fig1_HTML.jpg

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